Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00422 ATGAAGACCATAATGTCGGCCAAATCCCCCCACGACACTTCCTTCTCCTTCTCAAGGAGATACTTCCACTGGAAAAAGAAGCCCTTggacgaggaggaggaggaggaggaggaccaagaacgagaagaggaaagagaaaTCCTAAACCACACAACCTCCTTCTCCCACTTCCAAGAACCACCAAGGAAAAGCAAAAGACCCCACTTCTCAAGGTCGAAGCTCAAGTCAGCCCTACTCACGCTACCCTTCACGAAGCGACCACCCTCCCTCGGCACACGTGTGGTGGGCACGCTCTTCGGCCACCGCCGCGGCCACGTGCGGTTCGCCTTCCAGGAAAACCCCAAGCTGGGCCCGGCCTTCCTCCTGGAGCTCCCCACGCCCACCAGCCTCCTCGTCCGCGAGATGGCCTCGGGCCTCGTCCGGATAGCCCTCGAGTGCGACAAGCCCAACAAGGGGGGTGCCAATACCAGTCGCAAGCTGCTCGAGGAGCCTCTCTGGAGAAGCTACTGCAACGGGAGGAAGTGCGGGTACGCCAACCGCCGCCAGTGCGGGCCCGAGGACTGGGCCGTGCTGCGGGCCGTGGAGCCCATTTCGATGGGCGCGGGCGTGTTGCCGGTGAGTGGAGGTGTCTCCGACGAGGGGGAAGTGATGTACATGAGAGCGAGGTATGAGAGGGTTGTGGGCTCCAAAGACTCTGAAGCCTTCTACATGATGAACCCTGATGGAACTGGGGGTCCTGAACTCAGCATTTACTTCATCAGGGTTTAG 768 0.5599 MKTIMSAKSPHDTSFSFSRRYFHWKKKPLDEEEEEEEDQEREEEREILNHTTSFSHFQEPPRKSKRPHFSRSKLKSALLTLPFTKRPPSLGTRVVGTLFGHRRGHVRFAFQENPKLGPAFLLELPTPTSLLVREMASGLVRIALECDKPNKGGANTSRKLLEEPLWRSYCNGRKCGYANRRQCGPEDWAVLRAVEPISMGAGVLPVSGGVSDEGEVMYMRARYERVVGSKDSEAFYMMNPDGTGGPELSIYFIRV 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00422 255 PANTHER PROTEIN MIZU-KUSSEI 1 1 255 IPR006460 GO:0010274
Cca06g00422 255 Coils Coil 29 49 - -
Cca06g00422 255 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 94 255 IPR006460 GO:0010274
Cca06g00422 255 MobiDBLite consensus disorder prediction 28 71 - -
Cca06g00422 255 Pfam Protein of unknown function, DUF617 94 254 IPR006460 GO:0010274
Cca06g00422 255 PANTHER OS01G0642600 PROTEIN 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00422 Cca-Chr6 13160682 13161942 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00422 06 13160682 13161942 Cca06g00422 06 13160682 13161942 ECH