Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00415 ATGTCAAAAGTCAACCAAACCCTAATTCCCCAAAATGTGGTCTGCAATAACCTCTATCACCCCTCCGCTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCCGACGACTTCGGCGGCTGGGCCCTCCCCCACGCCCCGGCCCACTCCACCGTCAACAAACCTCCCCTCATCCACCCCAATTCCCCATCTCCTTCCTACGCCCTCCTCGGCTTCGGCACTTCCCTCGCTCTTCTCCTCGCCGTCTTCGCCGCCTCCAGGAGAGGGTTCCACGTTCCGTTCGCGAGACCGTTGCAAGGGCTGTGGACTCGCGTGGAGACTCGCCGTGATCAAAACGACACTCCGGAGTCTGACGTTTCTGCCGGAACCAAGTCAACTGTGTCCGAGAACAGCGTTGCCGTTACGGAAACTGCTGTGGAAAAGCTTGAACGAATTGTGATCCCGGTTTCGGTGGATTCTACACAAGAAGAAGCATTGTCAGTCCTAAAGACACTGAAGATAATTGAAGATGACGTAGAAGCCAATGAATTGTGTACCAGAAGAGAATTTGCTAGATGGCTAGTTAAATTGAATTCTTCCTTGGAAAGGAATCCTAAACACAGGATCGTTCCTATAGTATCACTTTCTGGATCTGTAGTTGCTGCATTTGATGATATCAGTATTGTCGACCCAGACTTTAGATCCATTCAAGTCTTAGCAGAAGCAGGTGTGATCCCCAGCAAATTATCATGGAATGATAGTTCCAATTACGATGGATTTGACAGTCAAGAAAACATAAACTTTTTTCCTGATAGATTCATCTCACGACAAGATCTAGTAGATTGGAGAGCTCAGCTGGAATATGAATTTTTCTCTGGGGTAATTGATCAGATATCAATTAAAAAAGCAGGTTATATGGATGTGAAGGAAATCACTTCTCCAGCAGTTTATGTGGACATGTTGGCAGGGGATAGGAGTATACTTAGAAAAGTTTTTGGACAGAGCAAGCGATTTCAGCCAAACAAACCTTCAACAAAAGCACAAGCAGCGGTGGCTCTGACAAGTGGCAGGATGAAGGAGGCAATATCAGCTGAAATGTTGAGAATAGAAGCTGAGAATTCTGCCAGATTGGCTGAGGCAGAAGAGATCAGGTCTGAGTTGCTTAGCCGAGGAGATATACAGAGGTTTTGGGATGAGAAGCTTAATAAAGAGAAAATTCGTGGTTTTGAGGTAGAGAGGCTTTATCATATGGAAGTAAAAAATTTGCAAGATGAGGAGATCAATCAAGATAAGATATATGCGGAGTATTTAAAAGAAAAGGCAGCGATGGATTGTCAGAAGCAGCTGCTGCTTAGCTTAAAGAAAGAAATTGATGAGATATCAGAAAAACTTGCATCAGAGAGAGTCATATATCTGGACGAAAGGCATGTTGTACAAAAGTTGCTCAAAGATTTAGAATTCAAGCATGAAGAAATGCTTGACACCAAATCCACTCTAGAAGCTGAGAAAGAAGCTCTTCAGATTCTTAGATCTTGGGTGGAGGACGAGGCAAGGAGAAGCCAAGCTCGGGCAGCTGTTCTCGAAGAGGTAGGGCGAAGATGGAAATGGGAGGACCAAGCTTGA 1689 0.4221 MSKVNQTLIPQNVVCNNLYHPSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDDFGGWALPHAPAHSTVNKPPLIHPNSPSPSYALLGFGTSLALLLAVFAASRRGFHVPFARPLQGLWTRVETRRDQNDTPESDVSAGTKSTVSENSVAVTETAVEKLERIVIPVSVDSTQEEALSVLKTLKIIEDDVEANELCTRREFARWLVKLNSSLERNPKHRIVPIVSLSGSVVAAFDDISIVDPDFRSIQVLAEAGVIPSKLSWNDSSNYDGFDSQENINFFPDRFISRQDLVDWRAQLEYEFFSGVIDQISIKKAGYMDVKEITSPAVYVDMLAGDRSILRKVFGQSKRFQPNKPSTKAQAAVALTSGRMKEAISAEMLRIEAENSARLAEAEEIRSELLSRGDIQRFWDEKLNKEKIRGFEVERLYHMEVKNLQDEEINQDKIYAEYLKEKAAMDCQKQLLLSLKKEIDEISEKLASERVIYLDERHVVQKLLKDLEFKHEEMLDTKSTLEAEKEALQILRSWVEDEARRSQARAAVLEEVGRRWKWEDQA 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00415 562 Coils Coil 504 531 - -
Cca06g00415 562 PANTHER SLH DOMAIN PROTEIN 63 561 - -
Cca06g00415 562 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 63 561 - -
Cca06g00415 562 MobiDBLite consensus disorder prediction 135 156 - -
Cca06g00415 562 Coils Coil 24 24 - -
Cca06g00415 562 Coils Coil 465 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00415 Cca-Chr6 12967660 12972528 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00415 06 12967660 12972528 Cca06g00415 06 12967660 12972528 ECH