Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00388 ATGATGCTGCATTTTGTACAGCCGTCAAAGCTGAAAACCAAGAAGATAGTGTTTGAGGATGTATATGCTGCTTGTGATTCTGCAACACTTGAGCATCTTAAGGAACTAAGCTCAAAGCGTAAAGCGATTGAAGATTCTATTAATGAGAGCAGCTTCATTACAGAAGCTATTGCAAAAGAAATGTCTGGAGGGTTGGAATCTCGCTATGAACAGGATGTTCACAAAATAGAGCAGTATCTGCCATTACTGGAAAATTTGTTTCCCTATGCTGATGTAACAAACACCAATTACCGAATGGCTCAATGTACTGCAGCTCTTAAGATACGCTGGAGTAGTGCCCTGAGCACATCTTCTTTCTTCAATTTCAAGGGCCCCAAGTTTTTCCAAATTGACAATTTGCGATTTGAGCTTGGTATGACCCTTTTTCTTTGTGGTGGAATCCTGCGAGAGAGGGCTTTAGAAGTTTTATCAACTGATTTGGTTCAATCTGCCACCATTTTCAGACAAGCTTCTGGCATTTATCAACACCTGGCACAAGATGTTCTTCCCCCCTTACAGCCTGCATTGCCTCTAGAAAAGCCACCTGAAGCTCTGGCTGCAGTATCCACCATTATGAGCCTCATTTGCTTGGCAGAGGCCCAGGCAGTAACCATAAGGAAGGCTGAAGAGAAAGGTACTTCTTCAAGTCTTCTGGCAAAGTTGCATCATGGTGTTACACTTTTTCTTGAAGAAGCTATTGGAATTTTTCATACAGTTGTCACACAGTGCAAAGACATTTCATCACGCTTATTGGAATTCATGTATTTCTGCAAGTGTTTACATGAGTTGAAAGGTCAGCAATACCATGCAGAAAGCTTGAAAGCATGTGGTCAAATAGGGGCTGCTATTGGAGTTCTTTGTTCTGTGTTGAGTAATGTAAAAAAGAAGATACCAGGAGAAGAACCTTGGAAATCTATTTACCAAAAGCAAATTGAAGATGCTTCTGAAGTGCTCAGAAAGTTTGTACATGAGAATGATTTTGTTTGGCATGAGAAGATCCCTTCAGGAGATGAGTTACCCTTGCCAGAGGGTAATAAAATAGTCACTTTTAAACCTTATAGTCCCAAAAGATGGGAAACACCACTTGCTTTCAAGAGAAAAATGTAG 1146 0.4066 MMLHFVQPSKLKTKKIVFEDVYAACDSATLEHLKELSSKRKAIEDSINESSFITEAIAKEMSGGLESRYEQDVHKIEQYLPLLENLFPYADVTNTNYRMAQCTAALKIRWSSALSTSSFFNFKGPKFFQIDNLRFELGMTLFLCGGILRERALEVLSTDLVQSATIFRQASGIYQHLAQDVLPPLQPALPLEKPPEALAAVSTIMSLICLAEAQAVTIRKAEEKGTSSSLLAKLHHGVTLFLEEAIGIFHTVVTQCKDISSRLLEFMYFCKCLHELKGQQYHAESLKACGQIGAAIGVLCSVLSNVKKKIPGEEPWKSIYQKQIEDASEVLRKFVHENDFVWHEKIPSGDELPLPEGNKIVTFKPYSPKRWETPLAFKRKM 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00388 381 PANTHER BRO1 DOMAIN-CONTAINING PROTEIN BROX 1 378 - -
Cca06g00388 381 Pfam BRO1-like domain 103 366 IPR004328 -
Cca06g00388 381 Gene3D alix/aip1 like domains 4 376 IPR038499 -
Cca06g00388 381 PANTHER PCD6 INTERACTING PROTEIN-RELATED 1 378 IPR045251 GO:0071985
Cca06g00388 381 CDD BRO1_Alix_like_2 6 368 - -
Cca06g00388 381 ProSiteProfiles BRO1 domain profile. 1 381 IPR004328 -
Cca06g00388 381 SMART BRO1_2 4 373 IPR004328 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00388 06 12068810 12073010 Cca06g00388 06 12068810 12073010 ECH