Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00387 ATGGCTGAGAAACAGCTCATCGTTGCCGTCGAAAGTACTGCTGCGTTGGGACCCTATTGGGATGCCATTCTAATGGATTATCTCGAGAAGATTATCAGGTGTTTTGGTGGAAATGACTCAACTGGACAGAAGCCTTCTGCTTCCAATGTGGAGTTTGCTCTCGTCACCTTTAATACTCATGGATGTTATTCTGGTTGGCTTGTGCAACGAACTGGTTGGACTAGAGACCCAGATGTTTTCTTCCTGTGGCTATCATCTATACCCTTCAATGGTGGTGGTTTTAATGATGCAGCAATTGCTGAAGGGCTTTCTGAAGCTCTGATGATGTTCCCAAATTCTCAAAGCGGAGGCCCTAATCAGCAGAGTGTGGACATGCATAAGCATTGTATCCTTGTTGCAGCAAGTAATCCCTATCCGTTGCAGACACCAGTTTATGTTCCGCGACAACAGAACCTAGAGCAGACTGAAACCATTGACTCAGACCCAGGGAGCCGGTTATATGATTCTGAAGCTGTAGCTAAAGCATTTCCTCAGTTTTCTATTTCTCTGTCAGTCATCTGCCCAAAACAACTTCCCAAAATTAAAGCCATCTACAATGCGGGAAAACGAAATAGTAGAGCAGCTGATCCACCAGTTGAAGCTAAAAACCCTCATTTTCTTATTTTAATATCAGAAGGTTTCAAGGAAGCCCGGAGTACTTTGAGTCGCTCGGGGATAACAAGTTTGCCTTCAAATCAAAGTCCTGTTAAAGTAGATTCTGTTTCTGTCACACCAGTTACAGGGGCACCCCCAACTTCTATGCCATCAGTTAATGGATCTATTGCAAACCGGCAACCAGTTTCTGCTGGGAATGTGGCTCCTGCTACTGTAAAAGTGGAGCCAGTTCCTGTAACATCTATGGTATCTGGACCTGCTTTTCCTCATAATTCATCAGTTCCTCGTGCTACTAGTACTAGCCAAGGAGTTCCGAGCTTGCAGACGTCTTCTCCATCTTCTGTTTCTCAAGATATTATATCAAATAATGAAAATGCTCAGGATACAAAGCCTACAGTGTCAATGCTGCAGCCGCTTCGACCAGTGAATCCCGCGCAAGCAAATGTGAACATTTTGAACAATCTCTCTCAAGCACGGCAGGTGATGAACTCTGCTGCCTTAAGTGGTGGAACCTCCATGGGACTTCCGACAATGGGTCAGACTCCTGTTGCCATGCACATGTCAAACATGATATCTAATGGGATGACATCTTCTGTACCTGCGGCTCAAAATGTATTTTCATCTGGACAGTCAGGAATAACATCAATTACTAGTTCTGGACCTCTTACTGTTCCTGCACAGGTTGGACAAAATTCAGGTCTTGGTTCGTTAACTTCAAACACTTCTAATTTGTCATCAAGTTCAAACATCGGGATTACACAATCTTTGGGTAATCTTCAAGGGCCTGTTAGTATGGGACAACAGGTGTCTGGTATGAGCCAAGGAAACATTTCTGGGGCCCAAATGGTTCAAGGTGGAGTTAGCATGAACCAAAATGTAATGAGTGGTCTTGGTCCATCAGTTGTCTCTTCTGGGACTGGCACGATGATTCCTACTCCAGGAATGTCTCAACAAGGACAATCAAGCATGCAGCCACTTGTGAACAATGCTGCAGCTAATATGCCCTTGTCACAACAGACATCAGGTGGTATGCAATCAGCACAATCCAAATATCTCAAGGTCTGGGAGGGAAGCTTGTCTGGGCAAAGACAAGGGCAGCCAGTATTTATCACCAAACTTGAAGGTTACAGGAATTCTTCTGCCTCTGAAACACTTGCAGCAAACTGGCCCAATGTAATGCAAATAGTTCGGCTTATATCTCAGGACCACATGAATAACAAACAATATGTAGGAAAGGCAGATTTTCTAGTTTTTCGGGCAATGAACCCGCATGGATTTCTTGGTCAGCTGCAGGAAAAGAAGCTGTGTGCAGTTATTCAATTACCATCACAGACGTTGCTACTATCTGTTTCTGACAAAGCCTTCCGCTTGATTGGGATGCTTTTTCCTGGGGATATGGTTgtgtttaagccacaattgtccacaacagcagcagcttccacaattgcagcaactgcaacctcagcagcaacagATGGTTGGGGCTGGAATGAGTCAAGCCTATGTTCAAGGCCCTGCAAGGTCACAGTTGGTTTCTCAGGGACAAGTTTCATCACAAGGAGCAACGAACATTGGTGGAGGGGGCTTCATGAGTTAGCTCAATTTTTCATAGGTCCTAATCACCACAACGGTAGTGTGCCCATTTGA 2301 0.432 MAEKQLIVAVESTAALGPYWDAILMDYLEKIIRCFGGNDSTGQKPSASNVEFALVTFNTHGCYSGWLVQRTGWTRDPDVFFLWLSSIPFNGGGFNDAAIAEGLSEALMMFPNSQSGGPNQQSVDMHKHCILVAASNPYPLQTPVYVPRQQNLEQTETIDSDPGSRLYDSEAVAKAFPQFSISLSVICPKQLPKIKAIYNAGKRNSRAADPPVEAKNPHFLILISEGFKEARSTLSRSGITSLPSNQSPVKVDSVSVTPVTGAPPTSMPSVNGSIANRQPVSAGNVAPATVKVEPVPVTSMVSGPAFPHNSSVPRATSTSQGVPSLQTSSPSSVSQDIISNNENAQDTKPTVSMLQPLRPVNPAQANVNILNNLSQARQVMNSAALSGGTSMGLPTMGQTPVAMHMSNMISNGMTSSVPAAQNVFSSGQSGITSITSSGPLTVPAQVGQNSGLGSLTSNTSNLSSSSNIGITQSLGNLQGPVSMGQQVSGMSQGNISGAQMVQGGVSMNQNVMSGLGPSVVSSGTGTMIPTPGMSQQGQSSMQPLVNNAAANMPLSQQTSGGMQSAQSKYLKVWEGSLSGQRQGQPVFITKLEGYRNSSASETLAANWPNVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAFRLIGMLFPGDMVVFKPQLSTTAAASTIAATATSAATDGWGWNESSLCSRPCKVTVGFSGTSFITRSNEHWWRGLHELAQFFIGPNHHNGSVPI 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00387 766 MobiDBLite consensus disorder prediction 306 336 - -
Cca06g00387 766 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25 1 695 IPR045105 -
Cca06g00387 766 Pfam Mediator complex subunit 25 von Willebrand factor type A 3 225 IPR021419 -
Cca06g00387 766 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25 1 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00387 Cca-Chr6 12014668 12031327 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00387 06 12014668 12031327 Cca06g00387 06 12014668 12031327 ECH