Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00386 ATGGTTTCAGCTTCTTCTCCTCCTTCTAAGGCAATGGAACTTCAATCAGATAAAAAATGTGTGGAGAATGGTCCTACTCGCAATGCCAAATGGTGGTACTCAACTTTTCACACTGTGACAGCCATGATTGGTGCAGGTGTTCTCAGTCTGCCCTATGCCATGGCATATCTAGGATGGGTGCCAGGGACCTTGATGTTGTTGTTAGCTTGGTGTCTGACCTTAAACTCAATGTGGCAAATGGTCCAACTCCATGAGTGTGTTCCTGGAACTCGGTTTGATCGATACATTGATCTTGGTAGACATGCTTTTGGACCAAAGTTAGGACCATGGATTGTGCTGCCGCAGCAACTGATTGTCCAAGTTGGGTGTGACATTGTTTATATGGTCACTGGAGGGAAGTGCCTAAAGAAGTTCATGGAGGTTGCTTGCACCAATTGCACACAACTCAAGCAGTCCTATTGGATTCTCATTTTTGGTGCCATCCATTTCTTTCTGTCTCAGCTTCCCAATTTCAATTCTGTAGCAGGGGTTTCTCTAGCAGCTGCTGTGATGTCACTAAGCTATTCAACTATATCCTGGGTGGCTTGTTTGGATAGAGGTCGTGTTGACAATGTTAGCTACGCATACAAGCAAACCAGTTCTGCTGACTTAATGTTCCGAATGTTCAATGCACTTGGTCAAATTTCATTTGCATTTGCTGGCCATGCTGTGGCCCTTGAAATTCAGGCCACAATTCCATCAACCCCTGAGAAGCCCTCAAAGATACCAATGTGGAAAGGTGCTATTGGTGCCTATGTCATCAATGCCATATGCTATTTCCCAGTTGCACTTGTAGGATATTGGGCCTTTGGAAGAGATGTTGAGGATAATGTGCTTATGGAATTTGAAAAACCAGCATGGCTCATTGCCTCAGCTAACTTGATGGTGTTCATTCATGTCATTGGTAGCTACCAGGTTTATGCTATGCCTGTTTTTGACTTGATTGAGAAGATGATGACCAAAAAATTGAACTTCCCTCCGGGACTAGCACTTAGACTTGTTGCTAGATCTACTTTTGTAGCTTTTACCTTGTTTGTTGGGGTCACATTCCCTTTCTTTGGTGATCTTCTGGGGTTCTTTGGTGGCTTTGGTTTTGCTCCTACTTCATACTTTCTTCCTAGCATAATGTGGCTGATAATCAAGAAGCCAAAGAGATTCAGCATCAACTGGTTCATCAATTGGGCTTCAATATACATTGGGGTGTGCATTATGTTGGCATCTACAATTGGTGGCTTAAGGAACATTGTTACTGATGCCTCTACTTATAAGTTTTACACCTAA 1320 0.4318 MVSASSPPSKAMELQSDKKCVENGPTRNAKWWYSTFHTVTAMIGAGVLSLPYAMAYLGWVPGTLMLLLAWCLTLNSMWQMVQLHECVPGTRFDRYIDLGRHAFGPKLGPWIVLPQQLIVQVGCDIVYMVTGGKCLKKFMEVACTNCTQLKQSYWILIFGAIHFFLSQLPNFNSVAGVSLAAAVMSLSYSTISWVACLDRGRVDNVSYAYKQTSSADLMFRMFNALGQISFAFAGHAVALEIQATIPSTPEKPSKIPMWKGAIGAYVINAICYFPVALVGYWAFGRDVEDNVLMEFEKPAWLIASANLMVFIHVIGSYQVYAMPVFDLIEKMMTKKLNFPPGLALRLVARSTFVAFTLFVGVTFPFFGDLLGFFGGFGFAPTSYFLPSIMWLIIKKPKRFSINWFINWASIYIGVCIMLASTIGGLRNIVTDASTYKFYT 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00386 439 PANTHER OS05G0424000 PROTEIN-RELATED 17 435 - -
Cca06g00386 439 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 6 17 435 - -
Cca06g00386 439 Pfam Transmembrane amino acid transporter protein 28 423 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00386 Cca-Chr6 11982711 11986693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00386 10 438 Organic Solute Cotransporters AT1G25530 75.524 0.0 660
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00386 06 11982711 11986693 Cca06g00386 06 11982711 11986693 ECH