Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00385 ATGAAGAGTGCGATTTGTGGGAGAATTCTCTCTCCCAATCACGTCTTCAAACCAGGGGACACAAATTCATTTTGTAAAGGACCATACTCCAATCTTTGTGTACCCATGGCTGTATTGGCAACAGGACCTGGTAAAGGAGGTGGGCTGCTGGAAAAGCCAGTTATCGAAAAAGTCGCTCCTGGCCGTGAGTCTGAATTTGATTTGAAGAAATCAAGGAAAACGGCACCACCTTATCGTGTAATATTGCACAACGACAACTTCAATAAACGGGAATACGTGGTCCAAGTACTGATGAAGGTCATCCCTGGAATGACCCTTGATAATGCAGTTAACATCATGCAAGAAGCACACTACAATGGGTTGTCAGTGGTGATCATATGTGCCCAAGCTGATGCTGAAGATCATTGCATGCAACTAAGAGGCAATGGGTTGTTCAGTTCAATTGAACCTGCAAGTGGTGGCTGCTGA 468 0.4487 MKSAICGRILSPNHVFKPGDTNSFCKGPYSNLCVPMAVLATGPGKGGGLLEKPVIEKVAPGRESEFDLKKSRKTAPPYRVILHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSVVIICAQADAEDHCMQLRGNGLFSSIEPASGGC 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00385 155 Gene3D - 72 150 IPR014719 -
Cca06g00385 155 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 1 155 IPR022935 GO:0006508
Cca06g00385 155 SUPERFAMILY ClpS-like 72 150 IPR014719 -
Cca06g00385 155 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTOR PROTEIN CLPS 1 155 - -
Cca06g00385 155 Pfam ATP-dependent Clp protease adaptor protein ClpS 74 141 IPR003769 GO:0030163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00385 Cca-Chr6 11953486 11957323 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00385 06 11953486 11957323 Cca06g00385 06 11953486 11957323 ECH