Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00362 ATGGCGGCGAGAAGCGTTTCGCTGAGGCAAATCTTCGCGGAGAGGAGCAAGGAGAGGCTCCTCTCGCGGAGGGACCTGCCGGAGCTGAGGCTGAAcggcggcggcggcggtggcggctgcggcggAGATGTTCCGCACGCGCTCTCGGATCGTGTGGCGCGGGTGTGGCGCGGCGTGGGCGAGTTCTTCGGCGAGCTTAGCGACATGGCGCGGTCGGATCCGAGGAAAGTGGTGTTCGCGGCAAAGGCGGGGCTGTCGCTGGCGCTGGTTTCGCTGTTCATTTACATAAAGGAGGAGCAGCTGAGCAAGTACTCAATCTGGGCCATTCTTACGGTCGTTGTCGTTTTCGAATTCAGCGTAGGGGCGACATTGAACAAAGGGTTCAATCGTTCATTGGGAACGATTTCTGCTGGGGGGCTTGCGCTGGGTATTGCTGAGTTGGCCGTCCTATCCGGGAAGTTCGAGGAACTCATTATCGTACTTTGTATATTTATTGCAGGATTTTGTGCAAGCTATGTAAAGCTACTGCCTGCAATGAAGACATATGAATATGGCTTTCGGGTGTTTTTGTTGACATTTTGTATTGTATTGGTATCTGGGAGAACTAGCAGAGAATTTTTCTCCACAGCCTTTTACAGATTAATTCTGATTGCAGTTGGTGCTGGCATATGTTTGTTTGTAAATATTTTCATATACCCCATCTGGTCTGGGGAGGATCTGCATAAATTGGTGGTGAAAAATTTCAATGGAGTTGCTGCATCTTTAGAAGGCTGTGTTAATGGGTACCTGCAATGTGTTGCATATGAGAGGGTCCCTTCAAAAATTCTTGTTTATCAGGCGTCGGATGATCCACTTTACCGTGGTTATAGAGCAGCAGTTCAATCGTCTAGTCAAGAGGATGCTTTGGTAGATTTTGCATTATGGGAGCCACCTCATGGTCCATACAAGACATTCAATTATCCTTGGAGAAACTATGTTAAAGTCAGTGGAGCTTTGAGGCATTGTGCTTTCATGGTCATGGCAATGCATGGATGCATACTTTCAGAAATACAGGCACCCCCAGAAAAGAGGCTGGTTTTCAGTAATGAACTTCAGAAAGTTGGAACTGAAGGAGCTAAAGTATTGCGTCAACTTGGAAGCAAAGTGGAAAGGATGGAAAAGCTAAGCAATATAGACATTCTCTTGAACGTACATGATGCAGCTGAGCAATTGCAGATGAAGATTGATCAACAGTCATTTCTTTTGGTCAATTCAGAGAGCTGGCAGGTTGCAAAAAAGCCTAAAGAAATCGAAAACCATGACAATTTGATTGATGTCAAAGACCATGAAAACAAACACTCGCTGATCTCTTCCCTCAGTGAAACAGGGGTTGATTCAAGACTCAACATAAACATAGAGCATTCAATTCCCGAATTGCACATTTCACAAAGCATGATGTGCAAGAAAATATCATGGCCACGTCTCTCATTTTTAGGAGATAACCTGTTACTTGAGCAAGATTCCAAAGTATATGAAAGTGCCAGTTCTCTCTCTTTGGCAACATTTGCTTCACTTTTAATAGAGTTTGTTGCAAGGCTTCAAAATCTTGTGGATGAATTCCAAGATCTTAGTGAGAAGGCCAATTTCAAAGACCCGTTTGACCAACCGGTGTTGAAGTAG 1659 0.4406 MAARSVSLRQIFAERSKERLLSRRDLPELRLNGGGGGGGCGGDVPHALSDRVARVWRGVGEFFGELSDMARSDPRKVVFAAKAGLSLALVSLFIYIKEEQLSKYSIWAILTVVVVFEFSVGATLNKGFNRSLGTISAGGLALGIAELAVLSGKFEELIIVLCIFIAGFCASYVKLLPAMKTYEYGFRVFLLTFCIVLVSGRTSREFFSTAFYRLILIAVGAGICLFVNIFIYPIWSGEDLHKLVVKNFNGVAASLEGCVNGYLQCVAYERVPSKILVYQASDDPLYRGYRAAVQSSSQEDALVDFALWEPPHGPYKTFNYPWRNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRLVFSNELQKVGTEGAKVLRQLGSKVERMEKLSNIDILLNVHDAAEQLQMKIDQQSFLLVNSESWQVAKKPKEIENHDNLIDVKDHENKHSLISSLSETGVDSRLNINIEHSIPELHISQSMMCKKISWPRLSFLGDNLLLEQDSKVYESASSLSLATFASLLIEFVARLQNLVDEFQDLSEKANFKDPFDQPVLK 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00362 552 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 6 549 - -
Cca06g00362 552 Coils Coil 519 539 - -
Cca06g00362 552 Pfam Aluminium activated malate transporter 68 537 IPR020966 GO:0015743
Cca06g00362 552 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED 6 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00362 Cca-Chr6 11133123 11139515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00362 49 544 Miscellaneous Gene Families AT1G25480 64.591 0.0 643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00362 06 11133123 11139515 Cca06g00362 06 11133123 11139515 ECH