Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00348 ATGGAGCAGAAAGAGAATCATGCTGGAAGGAAAAAAGGAGGGCTCATCACAATGCCCTTCATCTTTGCTAATGAGGTTTGTGAGAAGTTGGCTGTGGTGGGTTTCAACACAAACATGATAAGCTACTTGACAACACAGCTTCATATGCCATTAACCAAAGCAGCTAACACCCTCACTAACTTCAGTGGAACTGCAAGCTTGACACCATTGCTTGGTGCTTTCATTGCTGACTCTTTTGCCGGAAAGTTCTGGACTGTCACCGCTGCTTCCATTATATACCAAATTGGGATGGTTAGTTTGACATTATCAGCAGTGCTTCCACAGTTTAGGCCACCTCCTTGTCACGGTGAGGAGGTGTGCAAACAAGCGAGTGCAGGACAGCTGGCAGTGCTATACATCTCACTTTTACTCGGTGCACTCGGGTCGGGTGGGATTCGCCCCTGCATCGTAGCGTTTGGGGCGGATCAATTTGATGAATCCGACCCGAAACAGACAACAAGGACATGGACTTACTTTAATTGGTACTATTTTGTGATGGGTGCGGCTATTCTTGTGGCTGTGACAGTTTTGGTTTACATTCAAGATAACATTGGGTGGGGATTGGGCCTGGGAATCCCCACCGTTGCGATGTTCATCTCAATTATTGCATTCATTGTCGGGTACCCGCTTTACCGGAACTTGAACCCGGTGGGTAGCCCGTTTACCCGGTTGGTGCAAGTGGGTGTGGCAGCATTTCGTAAGAGAAAGTTGCCGAATGTTGCACACCATGGCTTGCTATACCAAAATGATGAAATTGATGCGGCTATTTCAATGGGAGGGAAGCTTCTGCATACTGAACAGATGAAGTTTTTGGACAAGGCAGCAATTGTGACAGAAGAAGATGAGAGTGGGAAAGCACCCAACTTGTGGAGGCTAAGCACAGTTCACAGAGTGGAGGAGTTGAAGTCCATAATCAGGATGGGCCCAATATGGGCCTCGGGCATTCTTCTAATCACAGCCTATGCGCAACAGAGCACATTCTCCCTCCAACAAGCAAAAACAATGGACCGACACTTAACAAAAACGTTCGAAATCCCAGCAGGGTCCATGTCGGTCTTCACCATCCTCACCATGCTCACGACCACGGCCTTCTACGACCGGGTCTTCATCAAAGTGGCCCGCAGATTCACCGGGCTTGACCGCGGCATAAGCTTCCTCCACAGAATGGGCATTGGGTTCGTCATCTCAACCCTTGCCACCTTCGTGGCGGGCTTTATCGAAATGAAGCGAAAGAGAGCCGCTTGGGCCCACGGGCTTTTCGACCACCCACATGCCACCATCCCAATCTCGGTCTTCTGGCTCGTTCCACAGTACAGTCTCCACGGCATGGCTGAGGCCTTCATGTCCATTGGGCACTTGGAGTTTTTCTACGACCAGGCCCCAGAGAGCATGAGGAGCACTGCCATGGCACTGTTTTGGACTGCAATTTCTGTTGGGAACTATGTGAGCACCCTTTTGGTTACTCTTGTCCACAAGTTCAGTGCTGGGCCCAATGGCTCCAATTGGCTTCCTGATAACAACCTCAACAAGGGCAAGTTGGAGTATTTTTATTGGCTCATCACAGTGCTGCAGTTTCTTAATCTCATTTACTACTTGGTTTGCGCCAAATTGTACACTTACAAGCCAATTCAGGTCCATGACAAAGGGGATAGCAGTTCCGAAGTTGAACTCACCACCACAGTTTAA 1725 0.4904 MEQKENHAGRKKGGLITMPFIFANEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFSGTASLTPLLGAFIADSFAGKFWTVTAASIIYQIGMVSLTLSAVLPQFRPPPCHGEEVCKQASAGQLAVLYISLLLGALGSGGIRPCIVAFGADQFDESDPKQTTRTWTYFNWYYFVMGAAILVAVTVLVYIQDNIGWGLGLGIPTVAMFISIIAFIVGYPLYRNLNPVGSPFTRLVQVGVAAFRKRKLPNVAHHGLLYQNDEIDAAISMGGKLLHTEQMKFLDKAAIVTEEDESGKAPNLWRLSTVHRVEELKSIIRMGPIWASGILLITAYAQQSTFSLQQAKTMDRHLTKTFEIPAGSMSVFTILTMLTTTAFYDRVFIKVARRFTGLDRGISFLHRMGIGFVISTLATFVAGFIEMKRKRAAWAHGLFDHPHATIPISVFWLVPQYSLHGMAEAFMSIGHLEFFYDQAPESMRSTAMALFWTAISVGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITVLQFLNLIYYLVCAKLYTYKPIQVHDKGDSSSEVELTTTV 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00348 574 PANTHER BNACNNG27190D PROTEIN 9 560 - -
Cca06g00348 574 Gene3D MFS general substrate transporter like domains 2 560 IPR036259 -
Cca06g00348 574 Pfam POT family 83 515 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca06g00348 574 SUPERFAMILY MFS general substrate transporter 15 549 IPR036259 -
Cca06g00348 574 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 9 560 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00348 Cca-Chr6 10377983 10383084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00348 23 569 Organic Solute Cotransporters AT1G68570 78.142 0.0 889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00348 06 10377983 10383084 Cca06g00348 06 10377983 10383084 ECH