Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00320 ATGAAGGGGTCAAATAATCAACATACATCGAATTCTGGTTCAAAGCCTTTTCATCTCCAGCTTGCTCGTTTCCTAATCTATTTCCTCCTTTTAGCCTTTGGTGTAACCATTGGAATCATCATCAGTTTCTATCTTAAAAGCTGCAGCTTTAGTCTACAGTTCAATCAATTCTCACGCTCTTCATCAGAAAATGCGCCACCACCAATGCTCCCACTGCCAAATGAAAAACCAAAAGAAGTATCCGATTCTAACCTCACGAGTCAAGTGGGGTTGAAGGAGTATATTAAGCCTTCAAATGTTGTGCATGATATGAGTGATGAAGAACTGTTGTGGAGAGCTTCAATGACCCCTAAGATCCGTGAATACCCTTTTGATCGAGTCCCCAAGGTGGCTTTCATGTTCTTGGTGAGGGGTCCTGTGCCTTTGGCTCCCTTTTGGGAAATGTTCTTTGCAGGGCATGAAGGGTACTACTCCATCTACGTGCATTCGAATCCTTCTTATGATGGATCAGACCCTGAGAGTTCAGTGTTTCATGGCAGGAGAATTCCTAGTAAGATAGTGGAATGGGGGAAATTCAACATGATTGAGGCAGAGCGTCGGCTTCTGGGCAACGCGCTTCTTGATTTGTCAAACCAACGCTTTGTTCTCATATCAGAATCATGCATCCCTTTGTTCAACTTCTCAACAATCTACACTTATCTTATTCACTCCACCCAAAGCTATGTAATGGCTTATGACGAGGATACTCCTGTTGGACGTGGACGTTACAACGTCCACATGTCCCCAATGATCACTCTCGAACAATGGAGAAAAGGGTCTCAGTGGTTTGAAATGGACAGAGACCTTGCTCTAGAAGTTGTGTCAGACAAAACCTACTTCCCAGTGTTTCAAGAGTACTGCAAATTTTCATGTTATGCTGATGAACACTACTTGCCCACGTTTGTTAGCATCATGTTTTGGGAGAAGAATTCGAATAGAAGTTTGACTTGGGTTGACTGGTCAAAGGGAGGGCTACACCCAGCTAAGTATGTGAGACCAGAGGTTACTGTCGACTTCTTGGAGAATTTACGGAACCAAATGTGTGACTATAATGGAAATCAAAAAAATGTTTGTTTTCTTTTTGCGAGGAAATTCTTACCCACTTCCTTGACGAGGCTCATCAGGTTCGCTCCACGGGTCATGCACTTTTAA 1191 0.4316 MKGSNNQHTSNSGSKPFHLQLARFLIYFLLLAFGVTIGIIISFYLKSCSFSLQFNQFSRSSSENAPPPMLPLPNEKPKEVSDSNLTSQVGLKEYIKPSNVVHDMSDEELLWRASMTPKIREYPFDRVPKVAFMFLVRGPVPLAPFWEMFFAGHEGYYSIYVHSNPSYDGSDPESSVFHGRRIPSKIVEWGKFNMIEAERRLLGNALLDLSNQRFVLISESCIPLFNFSTIYTYLIHSTQSYVMAYDEDTPVGRGRYNVHMSPMITLEQWRKGSQWFEMDRDLALEVVSDKTYFPVFQEYCKFSCYADEHYLPTFVSIMFWEKNSNRSLTWVDWSKGGLHPAKYVRPEVTVDFLENLRNQMCDYNGNQKNVCFLFARKFLPTSLTRLIRFAPRVMHF 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00320 396 MobiDBLite consensus disorder prediction 61 82 - -
Cca06g00320 396 Pfam Core-2/I-Branching enzyme 130 356 IPR003406 GO:0016020|GO:0016757
Cca06g00320 396 PANTHER CORE-2/I-BRANCHING ENZYME 1 68 - -
Cca06g00320 396 PANTHER CORE-2/I-BRANCHING ENZYME 81 396 - -
Cca06g00320 396 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 81 396 IPR044174 GO:0016757
Cca06g00320 396 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 68 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00320 Cca-Chr6 8713898 8717727 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00320 06 8713898 8717727 Cca06g00320 06 8713898 8717727 ECH