Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00301 ATGAATGCCATTTATTCTCCTTTGCTTGCAACGCAGACATGTAAATTGCTTTCCCCTTTCGTCACTTTCCACGTAAACCACACTCTTTTAAACCTCACTTTCTCTCTCACACTCACACGCTCTTCCTCTGAATTCCGTTGCACCTGCAGCAGAAAAATGCCAGAAGATCAGTTGAGCAGATACACGATCAGATCACATGGAGCTAAAGTGGCAAGGATACATATGCATGACTGGTTGATTCTTTTGCTTCTTGTTATCATTGATGCCATCTTGAATGTAATAGAGCCATTTCACCGTTTTGTTGGAGAGGGGATGATGACTGACCTGAGATACCCATTAAAAGATAATACTATACCCTTTTGGGCTGTTCCAATAATAGCAATATTGTTGCCAATAGCTATCATTCTTGTTTACTATTTCATACGCAAGGATGTTTATGACTTCCACCATGCTATCTTGGGCCTTTTATTCTCTGTACTCATTACTGCGGTGATAACTGATGCTATCAAAGATGGTGTTGGACGGCCACGCCCAGATTTCTTCTGGCGTTGTTTCCCTGATGGAAAAGGGGTGTTTGATCCAGTGACAAGAAACGTTAGATGTACTGGAGACAAGGGTGTTATTAAGGAAGGACACAAAAGTTTTCCCAGTGGACATACCTCTTGGTCCTTTGCTGGACTTGGTTTTCTTGCATGGTATCTGTCCGGAAAAATTAAGGCATTTGACCGTAGGGGCCATGTTGCCAAACTTTGTATTGTTTTCTTTCCTCTTCTAGTGGCAGCTATGATTGCTGTCTCTCGTGTTGATGATTATTGGCATCACTGGCAAGATGTTTTTACTGGAGGGCTTATAGGTTTGACAATCGCTTCGTTTTGTTACTTACAATTCTTTCCACCTCCATATGACATAGATGGTTGGGGACCTCATGCATATTTCCGGATGTTGGCTGAATCTAATGTTGTTCAAACTTCTTCGAGCAACGATGATAATTTTTATGCGCAACATGCTGGGGTTCAGATTGTGTCTGTGTCTATCCCACCTCAACATGAAGGCGATAATGCACGAGTTAATAGATGGGACTCCAACCCCATGTCAGATGGATCACAGAATGCAAGGGTACACTGA 1125 0.4231 MNAIYSPLLATQTCKLLSPFVTFHVNHTLLNLTFSLTLTRSSSEFRCTCSRKMPEDQLSRYTIRSHGAKVARIHMHDWLILLLLVIIDAILNVIEPFHRFVGEGMMTDLRYPLKDNTIPFWAVPIIAILLPIAIILVYYFIRKDVYDFHHAILGLLFSVLITAVITDAIKDGVGRPRPDFFWRCFPDGKGVFDPVTRNVRCTGDKGVIKEGHKSFPSGHTSWSFAGLGFLAWYLSGKIKAFDRRGHVAKLCIVFFPLLVAAMIAVSRVDDYWHHWQDVFTGGLIGLTIASFCYLQFFPPPYDIDGWGPHAYFRMLAESNVVQTSSSNDDNFYAQHAGVQIVSVSIPPQHEGDNARVNRWDSNPMSDGSQNARVH 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00301 374 CDD PAP2_containing_1_like 107 296 - -
Cca06g00301 374 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 73 301 IPR036938 -
Cca06g00301 374 MobiDBLite consensus disorder prediction 352 374 - -
Cca06g00301 374 Pfam PAP2 superfamily 152 297 IPR000326 -
Cca06g00301 374 PANTHER LIPID PHOSPHATE PHOSPHATASE 2 53 357 - -
Cca06g00301 374 MobiDBLite consensus disorder prediction 358 374 - -
Cca06g00301 374 PANTHER LIPID PHOSPHATE PHOSPHATASE 53 357 IPR043216 GO:0006644
Cca06g00301 374 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 71 302 - -
Cca06g00301 374 SMART acid_phosph_2 150 293 IPR000326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00301 Cca-Chr6 8065138 8072638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00301 53 326 Lipid Metabolism Gene Families AT1G15080 78.909 1.08e-156 440
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00301 06 8065138 8072638 Cca06g00301 06 8065138 8072638 ECH
Cca06g00301 06 8065138 8072638 Cca07g02483 07 53602849 53607307 ECH