Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00296 ATGAGAATTCAAAATGGAAGGGTGTCATCCTTTAAGCTTGTAGCAATGAAGTGTGTTGTTCCCTTTACTTTGTTCCATTTTCTCTTGTTCATCTTCCCCCTAGTACTCTCTCTTAACTTAATTTCAGCTTTCTCTCCAAGTGGGTCTGCCAAACATCTCATAAAGTTTAACATAGGGGAAGAGAATTTGGGTCCATGGAAGAATGAAGTCACACAAATAGAACCACGTCCTGAAACTGAGGGTACTCTTGTGCTAGCAGCAAACAGGACCAATAGACCTGACATTCTACGCAGATTTCGACGTTACCATGGTGGTTGGGACATTTCAAATCGCCATTATTGGGCTTCTGTTGGATTCACTGGTGTGACTGGTTTCACCCTTGCTGTCCTATGGTTTATTTCATTTGGCTTAGCACTTGTGATTCATCTATGCTGCGGATGGGGAATTAACATCAAGGACAAAGGATCAAATCGTTTGCAAAGAATTTGTCTAGTGTTGCTGTTGTTATTCACCTGTGTTGTAACGACTGGATGTATTGTTCTTTCTTTTGGGCAGGATAAATTCCATGGTGAGGCAGTGAATACCCTCCATTATGTTGTAAATCAATCAGACTACACAGTGCAGACTCTAAGAAATGTTACAGAGTATCTCTCACTTGCCAAATCCATCAGGGTGGCAGAGATGTTTCTTCCATCTAATATCATGGATGATATTGACAATTTAAATGTGGATCTAAATACTGCAGCAGATACACTTTCTGAGCAAACAAATGAAAACTCTGTCAAAATACAAAAACTGTTCAATGCCGTGCGACTAGCTTTGATCATGATGGCAGCTATGATGCTTCTACTAGCTCTAATTGGATTAATTCTGTCTATCCTTGGATATCAACATGCAATCCTCGTATTTGTCATCAGTGGATGGTTATTGGTTGCAACCACATTCATTCTTTGTGGAGTGTTCACAATCCTTAATAATGCAATTTGTGACACGTGCATGGCCATGGGAGAATGGGTGGAGAATCCACATGCAGAATCTGCCCTTAGCAATATCCTTCCATGTGTTGATCAGAGAACAACAAACAAGACACTTTTTCAGAGTAAACAAGTGGTTACGAATATTGTTAGTGTTGTGAACCGGTTCATCAATGACACTGCAGATGCAAGTCCATCACAAGGTAGTATGAACTATTACAATCAATCTGGACCTACAATGCCTCCTTTGTGCTATCCCTTTGACTCTCACTTTCGACAACGCCACTGTACGCCTCAAGAAGTTTCCTCGGCCAATGCTTCATTGGTTTGGAAGAAGTATTTGTGTAAGACATCTGAAGATGGTGTTTGCAAGACTATTGGCAGGGTGACCCCAATGATTTACGTGGAGTTAGTACAAGTAGTTAATGAAAGTTATGCATTGGAACATTATACTCCAATTTTACTTGGCCTTCAGAATTGCAATTTTGTGAGGGATACATTCAAAGAAATTACTTCACGTTACTGTCCTCCATTGAACCATTATCTTAAGGTTATCAATGTAGGATTGGGCCTCATTTCAATTGGTGTCTTGCTTTGCCTTGTTCTCTGGATACTTCATAGGACCTTCATAGCTAAAAAACTGAAGAACAAATTCAGCAAGAGAAATTCGTCTTTGTCAATTGCAGTGAATGAAGTATAG 1674 0.399 MRIQNGRVSSFKLVAMKCVVPFTLFHFLLFIFPLVLSLNLISAFSPSGSAKHLIKFNIGEENLGPWKNEVTQIEPRPETEGTLVLAANRTNRPDILRRFRRYHGGWDISNRHYWASVGFTGVTGFTLAVLWFISFGLALVIHLCCGWGINIKDKGSNRLQRICLVLLLLFTCVVTTGCIVLSFGQDKFHGEAVNTLHYVVNQSDYTVQTLRNVTEYLSLAKSIRVAEMFLPSNIMDDIDNLNVDLNTAADTLSEQTNENSVKIQKLFNAVRLALIMMAAMMLLLALIGLILSILGYQHAILVFVISGWLLVATTFILCGVFTILNNAICDTCMAMGEWVENPHAESALSNILPCVDQRTTNKTLFQSKQVVTNIVSVVNRFINDTADASPSQGSMNYYNQSGPTMPPLCYPFDSHFRQRHCTPQEVSSANASLVWKKYLCKTSEDGVCKTIGRVTPMIYVELVQVVNESYALEHYTPILLGLQNCNFVRDTFKEITSRYCPPLNHYLKVINVGLGLISIGVLLCLVLWILHRTFIAKKLKNKFSKRNSSLSIAVNEV 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00296 557 Coils Coil 238 258 - -
Cca06g00296 557 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 27 532 IPR040283 -
Cca06g00296 557 PANTHER TRANSMEMBRANE PROTEIN 27 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00296 Cca-Chr6 7944253 7950533 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00296 06 7944253 7950533 Cca06g00296 06 7944253 7950533 ECH