Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00288 ATGCACCCTTACAACCGGCTACCGAGCAGTGGCCGCTCCACCCCGTCACCGCCGCAGTCCCCTCTCCGCTCCCCGCTCCGCCGCCACGCCCGCTCCAAGCCCGCCCGCTTAAACCCGCCCCGAACCGCCGCGCAACGCCTCGCCTGGGTCTTCCTCTCGCTCCTCCTCCGCCGCCAAGGCGTCTTCCTCTTCGCGCCTCTCATCTACATCCTCGGCATGCTCATTTACATCGCCACCGTCTCCTTCGACGTCGTTCCCTTCATCGACCACCGCCCCGCCCCCGGCTCCCTCTACCGCACCCCCGACCTCTACGCCAAGCTCCGCCCCGAGATGGACGCCGACCTCCATTCTTCCTCCGATGCGATATCTACGACATGGAGTATTCCACATAAAGGTGGTGAGTGGAAACCATGCATAAAAAGATCTTTAGAAGGCCTTCCTGAATCAAATGGATACATTTATGTAGAGGCTAATGGTGGCTTAAATCAGCAAAGGACATCGGTGTGCAATGCTGTTGCTGTGGCTGGCTACCTGAATGCTACTCTTGTGATCCCAAATTTCCAATATCATAGCATATGGAAAGATTCTAGCAAATTCAGTGACATTTATGATGAAGAATATTTTATCAGTACCTTGAAAAATGATGTACGGGTGGTTGAAAAAATTCCTGAGTACCTGATGGAAAGATTTGGCAGCAACATGACAAATGTTTACAATTTCAGGGTGAAGGCTTGGTCATCCATTCAGTATTACAAAGATGTGGTACTCCCAAAGTTACTTGAAGAAAAGGTTATAAGGATTTCGCCTTTTGCAAATAGATTGTCATTTGATGCTCCTCTAGTTGTTCAACGGCTCAGATGCTTAGCAAATTATGAAGCTTTAAGATTTTCAAGTCCTATATTGACCATCAGTGAAGCTTTGGTTGAGAGAATGAAGAAACATAGCATAATGAATGGTGGAAAATATGTCTCCATACATCTTCGTTTTGAAGAGGATATGGTTGCTTTCTCTTGTTGTGTTTTTGATGGTGGAGAACATGAGAGAGAAGACATGATTGCTGAAAGAGAAAGAGGTTGGAAAGGGAAATTTACAAAACCTGGACGAGTTATACGTCCTGGAGCAATCAGGATCAATGGAAAGTGTCCCCTCACTCCATTAGAGGTTGGTCTTATGTTGAGGGGAATGGGTTTCTCAAAGAACACATCTATCTATTTGGCATCTGGAAAAATATATGATGCTGAGAAAACAATGTCCCCACTATGGGAAATGTTTCCTAATTTGCAAACTAAGGAGACTCTAGCATCCGAAGAGGAACTTGCTCCATTTAAGAATTATTCTTCCAGGATGGCTGCTATAGACTACACTGTTTGTCTTCATAGTGAAGTGTTTGTCACTACTCAGGGTGGTAATTTCCCCCATTTTCTACTGGGCCACAGAAGATACTTGTTTGGTGGACACTCTAAGACAATTAAGCCTGATAAACGGAAATTGGCTCTACTCTTTGATACTACCAATATTGGATGGAAAAGTCTCAAACGTCATTTACTGAACATGAGGTCAAACAGTGATTCCAAGGGAGTTGAGCTAAAAAGACCAAATGATTCAATATATAGCTTTCCATGCCCTGATTGTATGTGCCACGCAAATAGAACTGATGAATCTAGATCTTCATTGAAAACTTGA 1683 0.451 MHPYNRLPSSGRSTPSPPQSPLRSPLRRHARSKPARLNPPRTAAQRLAWVFLSLLLRRQGVFLFAPLIYILGMLIYIATVSFDVVPFIDHRPAPGSLYRTPDLYAKLRPEMDADLHSSSDAISTTWSIPHKGGEWKPCIKRSLEGLPESNGYIYVEANGGLNQQRTSVCNAVAVAGYLNATLVIPNFQYHSIWKDSSKFSDIYDEEYFISTLKNDVRVVEKIPEYLMERFGSNMTNVYNFRVKAWSSIQYYKDVVLPKLLEEKVIRISPFANRLSFDAPLVVQRLRCLANYEALRFSSPILTISEALVERMKKHSIMNGGKYVSIHLRFEEDMVAFSCCVFDGGEHEREDMIAERERGWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFSKNTSIYLASGKIYDAEKTMSPLWEMFPNLQTKETLASEEELAPFKNYSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLLGHRRYLFGGHSKTIKPDKRKLALLFDTTNIGWKSLKRHLLNMRSNSDSKGVELKRPNDSIYSFPCPDCMCHANRTDESRSSLKT 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00288 560 PANTHER - 1 557 IPR024709 -
Cca06g00288 560 MobiDBLite consensus disorder prediction 1 38 - -
Cca06g00288 560 PANTHER PROTEIN ESMERALDA 1 1 557 - -
Cca06g00288 560 Pfam GDP-fucose protein O-fucosyltransferase 152 482 IPR019378 -
Cca06g00288 560 CDD O-FucT_plant 152 489 IPR024709 -
Cca06g00288 560 PIRSF UCP009360 24 550 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00288 Cca-Chr6 7590779 7626597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00288 122 547 Miscellaneous Gene Families AT1G22460 38.158 9.37e-93 293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00288 06 7590779 7626597 Cca06g00288 06 7590779 7626597 ECH