Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00284 ATGGACGATAACATTCTGGGCCTTCTCAAACTTCGAATTAAAAGAGGTATTAATCTCGCAATTCGCGATGCTCGTGCCAGCGACCCTTATGTTGTCGTCAAAATGGGCGAACAGAAGCTGAAGACTCGTGTTATAAAGAACAACTGCAATCCTGAGTGGAATGAAGAGTTGACCCTTTCTATAAAGGATGTTAAAACCCCAATACACTTGACGGTTTATGACAAAGACACTTTCTCTGTGGATGACAAAATGGGTGAGGCAGATATAGACTTGAAACCATATTTTGAGTGTGTGCAGATGGGTCTGAATTTGACCCAGCTCCCAAATGGTTGTTCACTCAAGAGGGTTCAACCAGGCAGAACTAACTGCCTTGCTGATGAGAGCAGCTGCATTTGGCAAGATGGCAAAATTGTCCAAGAAATGATCTTGAGATTGAGAAATGTTGAGCGTGGGGAAGTAGTTGTGGAAATTCAATGGGTTGATATTCCTGGTTGCAAGGGCTTATCAGGGGTAGAACTTTAA 522 0.4291 MDDNILGLLKLRIKRGINLAIRDARASDPYVVVKMGEQKLKTRVIKNNCNPEWNEELTLSIKDVKTPIHLTVYDKDTFSVDDKMGEADIDLKPYFECVQMGLNLTQLPNGCSLKRVQPGRTNCLADESSCIWQDGKIVQEMILRLRNVERGEVVVEIQWVDIPGCKGLSGVEL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00284 173 CDD C2_ArfGAP 6 151 - -
Cca06g00284 173 Pfam C2 domain 8 93 IPR000008 -
Cca06g00284 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 4 166 - -
Cca06g00284 173 Gene3D C2 domain 3 165 IPR035892 -
Cca06g00284 173 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Cca06g00284 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 92 IPR035892 -
Cca06g00284 173 SMART C2_3c 8 103 IPR000008 -
Cca06g00284 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 166 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00284 Cca-Chr6 7477272 7481632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00284 39 169 C2H2 Transcription Factor Family AT1G70790 67.939 2.99e-64 192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00284 06 7477272 7481632 Cca06g00284 06 7477272 7481632 ECH
Cca06g00284 06 7477272 7481632 Cca08g00302 08 4408832 4411368 ECH