Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01765 ATGATGATCTTGGAAGAGATGGGGTTCTGCAACGATTTGGATATGGTGGGAGGTCCTCCAGAGATGGGTGTGAGACAAAGTGGTGCGGTTGAGGATGACTACAGCGACGAGGAAATGGACGTGGAGGAGCTGGAGCGGAGGATGTGGAGGGACAAGCTGCGGCTGAAGCGAATGAAGGAACAAAGCAAGGCCAAGGAAGGGAGTGATGCAGCCAAGCAAAGGCAGTCGCAGGAACAAGCCAGGAGGAAGAAGATGTCAAGAGCTCAAGACGGAATCCTCAAGTACATGCTCAAGATGATGGAGGTCTGCAAGGCCCAAGGCTTCGTCTATGGAATCATTCCTGAGAAGGGGAAGCCCGTCACTGGGGCAAGTGATAACCTCCGCGAATGGTGGAAGGACAAGGTCAGGTTTGATCGCAACGGCCCTGCTGCCATAGCCAAGTACCCTGGGATGAATGATGGACCCAGTTCCATTGGCCCTACTCCTCACACTTTGCAGGAGCTTCAAGACACCACTCTTGGCTCACTCCTCTCCGCGCTTATGCAGCACTGTGACCCTCCCCAGAGGCGTTTTCCTCTTGAGAAGGCTGTTCCTCCCCCATGGTGGCCCACTGGGAATGAAGACTGGTGGCCCCAAATTGGCCTCCCCAAGGACCAAGCCCCCCCTCCTTACAAGAAGCCTCATGACTTGAAGAAGGCCTGGAAGGTCGGCGTTCTCACTGCCGTCATCAAACACATGTCTCCCGACATTGCCAAAATTCGCAAGCTCGTGAGACAGTCCAAGTGCCTTCAGGACAAGATGACGGCCAAGGAGAGTGCTACTTGGCTCGCCATCATCAATCAAGAGGAAGCCTTCGCCAGGGAGCTTTACCCTGACTATTGCCCCGTGTCCTCTGTGAGCGGAGGACACGGAACTCTAGTAGTCAATGATTATAGCGAGTATGACGTTGATGGCGGCAAGGTTGAGCCGAATTTTGATGTGGAGGACCGAAAGCCTGAGTCTCTCCATCCTGATAACAGGTCGGAGAGACTCGAGGGAAGGCTGCCGTTTCAGCAGCCTTCCCTAAATGTTGTCACGAATTTGGATTTCATTAGGAAAAGGAAGGTTTCAAATGACTTCAACATGATCGTGGATCACAAGATCTACACATGTGAGTACCCTCAATGTCCTTACAATGAACTCAGCCTTGGCTTCCATGACAGATCAGCTAGGGACAACCATCAGTTGAGTTGTGTGTATAGAAACAGCCCAGCAGATTTTGGTGGTGGTCTCAGTTTTCATGCCACTGAGGTTAAGCCTGTGATATTTCCTCAGTCATTTGTTCAACCAAATGCTTCAGCTCAATCTGGTAGCATGGTTCCACCTTCGCTTGGGGGAGTTCCGGAGGGTGACCAGAAAATGATTAGTGACCTTATGACAATCTATGACAATGTTCTTGGAAACAGGAATTTAAGCCCCACAAACTGTGTAGCTTTAGAAAACCATGATTTTTTCCCTGCTGGTCAAGGAATGGTCATGGAAGGAAACTTGTATGCACGGGAGGAAAGTCATTTTGACCGGTTCAAGACcatgaacatgaacatgaacatgaacatgaacCCTCCTTTTGATGCCAACCACAACAACAATAATGCTCACTTGATGTTTAGCTCACCATGCGAGTTGGCATCCTTGGCATCGTCCTTTGACTTTAAAGAGGATATTCAAGGAGTGGGGATGGATAACACCACCCTTCACAAACAGCAGCAAGACATTTCAATCTGGTACCAGTGA 1773 0.4935 MMILEEMGFCNDLDMVGGPPEMGVRQSGAVEDDYSDEEMDVEELERRMWRDKLRLKRMKEQSKAKEGSDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYPGMNDGPSSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKAVPPPWWPTGNEDWWPQIGLPKDQAPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEAFARELYPDYCPVSSVSGGHGTLVVNDYSEYDVDGGKVEPNFDVEDRKPESLHPDNRSERLEGRLPFQQPSLNVVTNLDFIRKRKVSNDFNMIVDHKIYTCEYPQCPYNELSLGFHDRSARDNHQLSCVYRNSPADFGGGLSFHATEVKPVIFPQSFVQPNASAQSGSMVPPSLGGVPEGDQKMISDLMTIYDNVLGNRNLSPTNCVALENHDFFPAGQGMVMEGNLYAREESHFDRFKTMNMNMNMNMNPPFDANHNNNNAHLMFSSPCELASLASSFDFKEDIQGVGMDNTTLHKQQQDISIWYQ 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01765 590 Gene3D - 160 293 IPR023278 GO:0003700|GO:0005634
Cca05g01765 590 SUPERFAMILY DNA-binding domain of EIN3-like 162 286 IPR023278 GO:0003700|GO:0005634
Cca05g01765 590 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 1 589 - -
Cca05g01765 590 MobiDBLite consensus disorder prediction 17 41 - -
Cca05g01765 590 Coils Coil 27 61 - -
Cca05g01765 590 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 589 IPR006957 GO:0005634
Cca05g01765 590 Pfam Ethylene insensitive 3 42 283 IPR006957 GO:0005634
Cca05g01765 590 MobiDBLite consensus disorder prediction 56 85 - -
Cca05g01765 590 MobiDBLite consensus disorder prediction 322 343 - -
Cca05g01765 590 Gene3D - 74 149 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01765 Cca-Chr5 37255280 37259236 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01765 2 589 EIL Transcription Factor Family AT3G20770 54.899 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Cca05g01765 EIN3 3e-124 No_clan