Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00439 ATGGGGTCAGAGCAAAATCGATTTCCTCAGCATGAAAGACGAAAGAGATGGGGAGGATGTTGGGGTGCATTTTCTTGCTTTGGTTCACAGAAAGGTGGGAAGCGCATTGTTCCTGCATCTCGCATTCCTGACAATAGTGGGCCAGCATCTCAGCCCAATGGACCTCAAGTGGTTGGGTTGACCAATCAAGCCACAGGACTAGCTCCTTCTCTCTTAGCCCCACCTTCTTCACCAGCATCCTTCACACATTCTGCCCTTCCTTCCACTGCACAATCACCTAGTTGCTTCTTGTCATTATCTGCTAACTCACCTGGTGGTCCTTCATCTACAATGTATGCCACTGGACCATATGCTCATGATACACAGCTGGTGTCTCCTCCAGTGTTCTCAAATTTCACTACTGAGCCATCCACTGCTTCTTTTACTCCTCCACCTGAGTTGGCTCATTTGACAACTCCCTCTTCGCCAGATGTACCTTTTGCTCATTTTCTCTCATCTTCGGTGGATCTCAAAAATAGTGACAAGGGTAACTACATCACTGCAAATGATCTTCAAGCTACATATTCACTCTACCCTGGAAGTCCTGCCAGTAGCCTTATATCTCCAATATCAAGGAACTCTGGTGACTGTTTATCATCTTCTTTTCCTGAACGGGAGTTCCGTCCACAGTGGGATTCATCACTGTCTCCTACGAATGGAAAATATCAGAGAACTGGGTCTGGGAGGGTATCTGGGCATGACACAAATGGTGTCACTATGGCATCCCAAGATACAAATTTCTTTTGCCCTGCAACCTATGCACAATTCTATTTAGACCAAAATCCTCCATTTCCTCATAATGGTGGGAGATTAAGTGTTTCGAAAGATTCAGATGTCCAATCTACTGGTGGAAATGGACAGCAGAATAGGCATGCTAGAAGTCCTAGGCAAGATGTGGAAGAAATAGAAGCATACCGAGCATCCTTTGGTTTCAGTGCAGATGAGATTATAACTACCCCTCAATATGTTGAAATTTCTGATGTAATGGAGGACTCATTTACCATGATGCCCTTCGCTTCTGGTAAGTCAACAATGGAAGAAAGCATAGAGCCTTCATTAATGAAAGGATTCAAAGCTCAGGAGACGCAGGTGGCATTGCAGAGCCTGAGAAGTCTTAAATCAGATCCAGTGAGCAAGGAAGCACATAATCAGGCCCCCGTATGTCAAGGATATGAAGATCTTAAATCACAAGGACATTGTAGCAACAGCTCTGGATTAAGTACACCTGACAACCGTACTCTCGGAGATGATGAGGATATATTCTCAAAAATGGAATCTTCCAGAGTCTGCAGGAAATATCAGATGGGGTTATCGTGCTCTGATGCTGAGGTTGACTATAGGAGAGGAAGAAGCTTACGAGAAGGAAAGGGAATGTGA 1416 0.4477 MGSEQNRFPQHERRKRWGGCWGAFSCFGSQKGGKRIVPASRIPDNSGPASQPNGPQVVGLTNQATGLAPSLLAPPSSPASFTHSALPSTAQSPSCFLSLSANSPGGPSSTMYATGPYAHDTQLVSPPVFSNFTTEPSTASFTPPPELAHLTTPSSPDVPFAHFLSSSVDLKNSDKGNYITANDLQATYSLYPGSPASSLISPISRNSGDCLSSSFPEREFRPQWDSSLSPTNGKYQRTGSGRVSGHDTNGVTMASQDTNFFCPATYAQFYLDQNPPFPHNGGRLSVSKDSDVQSTGGNGQQNRHARSPRQDVEEIEAYRASFGFSADEIITTPQYVEISDVMEDSFTMMPFASGKSTMEESIEPSLMKGFKAQETQVALQSLRSLKSDPVSKEAHNQAPVCQGYEDLKSQGHCSNSSGLSTPDNRTLGDDEDIFSKMESSRVCRKYQMGLSCSDAEVDYRRGRSLREGKGM 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00439 471 MobiDBLite consensus disorder prediction 286 305 - -
Cca05g00439 471 MobiDBLite consensus disorder prediction 221 243 - -
Cca05g00439 471 MobiDBLite consensus disorder prediction 44 61 - -
Cca05g00439 471 PANTHER OS01G0103800 PROTEIN 1 470 - -
Cca05g00439 471 MobiDBLite consensus disorder prediction 224 243 - -
Cca05g00439 471 MobiDBLite consensus disorder prediction 28 61 - -
Cca05g00439 471 MobiDBLite consensus disorder prediction 277 312 - -
Cca05g00439 471 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 470 IPR040420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00439 Cca-Chr5 9593074 9600271 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00439 05 9593074 9600271 Cca05g00439 05 9593074 9600271 ECH