Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00437 ATGGAGGAGACGGGAGTACTATCGGCGAAAGAGGCATTTGAGAAGCTTGAGAAGGTGGGAGAAGGGACATACGGGAAGGTGTACAGAGCAAGAGAGAAGGCCACTGGGAGGATCGTCGCACTCAAGAAGACTCGCCTCCACGAGGACGAAGAAGGTGTCCCTCCCACCACTCTCCGTGAGATTTCCATTCTGCGAATGCTCTCTCGCGATCCCCATGTCGTTAGGTTACTGAATGTAAATCAAGGTCTCAACAAGGAAGGCAAGACAGTGCTCTACTTGGTATTCGAGTATATGGACACCGATCTCAAGAAATATATCCGTTCTTTCCGTCAAACTGGAGAGAACATTCCACCTCAAACCGTCAAAAGCTTGATGTACCAACTTTGCAAGGGCGTTGCTTTCTGCCACGGTCATGGAATCTTGCACAGGGACTTGAAGCCTCACAATCTCTTGATGGACCGAAAAACAATGATGCTTAAAATAGCAGATCTTGGACTCGCTCGAGCATTCACTGTACCTATTAAGAAATACACGCATGAGATACTAACACTTTGGTATAGAGCCCCTGAAGTCCTCTTGGGAGCTACCCATTACTCAATGGCTGTCGACATGTGGTCCGTTGCCTGCATATTTGCCGAACTTGTCACTAAACAAGCACTCTTTCCTGGTGATTCAGAGCTGCAACAACTCCTTCATATATTCAGGCTATTGGGCACTCCTAAAGAAGAGATGTGGCCAGGCGTGAGTAAACTAATGAACTGGCATGAATACCCCCAATGGAACCCTCAAAATCTGTCAACGGCTGCTCCAAATTTTGGTGAGCTTGGCCTGGATCTGCTATCTCAAATGTTGAAGTATGAACCTTCCAAGAGGATTTCTGCAAAGAAAGCAATGGAACATCCTTACTTTGATGATCTGGACAAAAGGCACCTTTAG 936 0.4679 MEETGVLSAKEAFEKLEKVGEGTYGKVYRAREKATGRIVALKKTRLHEDEEGVPPTTLREISILRMLSRDPHVVRLLNVNQGLNKEGKTVLYLVFEYMDTDLKKYIRSFRQTGENIPPQTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDMWSVACIFAELVTKQALFPGDSELQQLLHIFRLLGTPKEEMWPGVSKLMNWHEYPQWNPQNLSTAAPNFGELGLDLLSQMLKYEPSKRISAKKAMEHPYFDDLDKRHL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00437 311 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Cca05g00437 311 SUPERFAMILY Protein kinase-like (PK-like) 11 306 IPR011009 -
Cca05g00437 311 PANTHER - 7 309 - -
Cca05g00437 311 SMART serkin_6 13 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00437 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Cca05g00437 311 Gene3D Phosphorylase Kinase; domain 1 8 99 - -
Cca05g00437 311 Pfam Protein kinase domain 13 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00437 311 PANTHER CELL DIVISION PROTEIN KINASE 7 309 - -
Cca05g00437 311 Gene3D Transferase(Phosphotransferase) domain 1 100 310 - -
Cca05g00437 311 ProSiteProfiles Protein kinase domain profile. 13 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00437 Cca-Chr5 9566022 9568034 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Cca05g00437 Pkinase 3.6e-71 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00437 05 9566022 9568034 Cca05g00437 05 9566022 9568034 ECH