Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00435 ATGCATTTGAGCGAGAACGAAGGGATAGAGGGGAAGGGGTTCGTGGTCACGGGTGGACTGGGATTCGTAGGATCTGCTCTCTGCTTGGAGCTCATCCGAAGAGGTGCGAGAGAGGTGCGAGCCTTTGACCTCCGCCCCTCTTCTCCTTGGTCCCCTCTTCTCAAGGATAACGGAGTCCTCTGCATCCAAGGCGATGTTGGCCGCAAAGAAGACGTGGAAAGGGCTCTCCGCGGGGCAGAGTGTGTGTTCCACCTCGCGGCCTTTGGAATGTCGGGCAAAGAGATGCTCCAATTCGGTCGCGTTGATCAAGTCAACATAAACGGCACTTGCCACGTCATCGACGCTTGCCTCGACCTCGGCATCAAAAGGCTCGTGTACTGCAGCACATACAACGTTGTCTTCGGCGGTCAACAGATCATCAACGGGAACGAGACGCTGCCTTATTTCCCAATCGATAACCATGTCGACGCATATGGCCGCAGTAAATCCATTGCCGAACAGCTCGTTCTCAAGAACAATGCCCGCTCTTTCAAGAACCACTCCGGGAATCGTCTCTACACTTGTGCCCTTCGTCCAGCTGCAATCTATGGACCCGGCGAAGACAGGCACCTCCCCAGGATAGTAGCCATGGCAAAGTTGGGTCTCCTTTTCTTCCGAATCGGTGACCCAACTGTGAAATCGGATTGGCTTTTTGTCGATAACCTTGTCCTTGCTCTTATTCTTGCCAGTATGGGACTTTTGGATCACAACCTTGCCAAGGGAAAACGCCCCGTAGCTGCTGGACAGGCCTACTTTATATCCGATGGTTCCCCGGTCAATTCTTTTGAGTTCCTTCAACCTCTACTTAGGAGTTTGGATTATGAACTACCAAACACTTCCCTATCTGTGGATCGTGCTCTTGTTCTTGGGAGGATTTGCTCGGCTGTTTACACAATCCTATATCCATGGCTCGATCGGTGGTGGCTTCCACAGCCATTCATCCTTCCCTCTGAAGTACACAAGGTGGGGGTGACTCATTATTTCTCTTATCTCAAAGCCAAAGAGGAGATCGGGTATGTTCCCATGGTGAGCCCGAGAGAGGGGATGGCTTCGACCATATCTTACTGGCAGGAGAGGAAAAGGAAAACTCTGGATGGTCCAACAATGCGCGAGTGGTTATTCTGTGTCATTGGAATGATCTCACTGTTTTGCGGTGCTTTCTTACCTGACATAGGGATTATATCCCTTCTCAGAGCTTTGTGTCTATTTTTCTTTCGCTCAATGTGGGTCACAAGGCTGGTGTTTCTTCTAGCTACAGCTGCACATGTTGGTGAGGCCATTTATGCTTGGTACCTGGCTAAAAGGGTGGATCCTGCCAATGCAAGAGGATGGTTTTGGCAAACTTTTGCTTTGGGGATATTTTCGTTGCGTTTACTCTTGAAAAGAGCAAGGAAATAA 1437 0.5024 MHLSENEGIEGKGFVVTGGLGFVGSALCLELIRRGAREVRAFDLRPSSPWSPLLKDNGVLCIQGDVGRKEDVERALRGAECVFHLAAFGMSGKEMLQFGRVDQVNINGTCHVIDACLDLGIKRLVYCSTYNVVFGGQQIINGNETLPYFPIDNHVDAYGRSKSIAEQLVLKNNARSFKNHSGNRLYTCALRPAAIYGPGEDRHLPRIVAMAKLGLLFFRIGDPTVKSDWLFVDNLVLALILASMGLLDHNLAKGKRPVAAGQAYFISDGSPVNSFEFLQPLLRSLDYELPNTSLSVDRALVLGRICSAVYTILYPWLDRWWLPQPFILPSEVHKVGVTHYFSYLKAKEEIGYVPMVSPREGMASTISYWQERKRKTLDGPTMREWLFCVIGMISLFCGAFLPDIGIISLLRALCLFFFRSMWVTRLVFLLATAAHVGEAIYAWYLAKRVDPANARGWFWQTFALGIFSLRLLLKRARK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00435 478 Pfam Transmembrane protein 254 387 473 IPR028110 -
Cca05g00435 478 Gene3D - 5 375 - -
Cca05g00435 478 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 360 - -
Cca05g00435 478 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 375 IPR036291 -
Cca05g00435 478 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 42E MEMBER 1 11 360 - -
Cca05g00435 478 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 294 IPR002225 GO:0003854|GO:0006694|GO:0016616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00435 05 9556200 9558799 Cca05g00435 05 9556200 9558799 ECH
Cca05g00435 05 9556200 9558799 Cca07g00218 07 2788875 2793288 PCT