Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00433 atgctgcccaggaaggagggaaTGATTGGGGACATTGAAGTTGATCAAGGGTCAAGACAATTACTTGGATGGTCTATGATTAGAGCTAGGACTAAGAAGGTAGAGGAGTTCCTACAGCAAGTGGTGGCAACAATCTTTGAAGCTACACCAAAGGAAAATAATAATAGTTATAATGAAGTGCTTATGGACAAAGTAAATGACAGAGATGACAAGTATGGAGGTAACTTAGAAAATCGTTGCCGCTTCCTACTACAAGTGGTGAAGGCAGTTGCTGATGAGATTGGAGCAAACAAGGTTGGGGTTTGGCTTTCCCTATTCGCTGATTATAATGATTATGAAGACTCTGATCCTCAAGCATTGAGTATTTATGTGGCTCAATCATTCAATGAATTGGGCATTTTGAAGGGGTTCAACAAGGGGACATTTATTGTAGCTGGTGGCTACAACAGGAGTGTTGGAAATGAAGCTATATCTAACACTACTGCAAATTTGGTTACATATGGATGCCTTTTTTTGGCTAACCCATACCCCCTCAAATGA 540 0.3833 MLPRKEGMIGDIEVDQGSRQLLGWSMIRARTKKVEEFLQQVVATIFEATPKENNNSYNEVLMDKVNDRDDKYGGNLENRCRFLLQVVKAVADEIGANKVGVWLSLFADYNDYEDSDPQALSIYVAQSFNELGILKGFNKGTFIVAGGYNRSVGNEAISNTTANLVTYGCLFLANPYPLK 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00433 179 Pfam NADH:flavin oxidoreductase / NADH oxidase family 58 124 IPR001155 GO:0010181|GO:0016491
Cca05g00433 179 SUPERFAMILY FMN-linked oxidoreductases 59 176 - -
Cca05g00433 179 Gene3D Aldolase class I 53 179 IPR013785 -
Cca05g00433 179 PANTHER NADH OXIDOREDUCTASE-RELATED 58 134 IPR045247 GO:0010181|GO:0016491
Cca05g00433 179 PANTHER NADH OXIDOREDUCTASE-RELATED 137 175 IPR045247 GO:0010181|GO:0016491
Cca05g00433 179 PANTHER 12-OXOPHYTODIENOATE REDUCTASE-LIKE PROTEIN 58 134 - -
Cca05g00433 179 PANTHER 12-OXOPHYTODIENOATE REDUCTASE-LIKE PROTEIN 137 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00433 Cca-Chr5 9505073 9506175 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00433 05 9505073 9506175 Cca05g00433 05 9505073 9506175 ECH