Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00422 ATGGAGAAGAAGGAAGACGAATTACAGGAAGTGCTTCGCGCTTTGCCTTCCGACGCCGTCAAGGATTTGTTGTCTCACCAGGTATGTGCCCGCTGCATCTTGCGCGTGTTTGGGGTCCAAGGCCGCGCCTATGCCTCTCCCTCCCTCTCTTCTCTCTTCGCACAACATTCCCAAACGCAACTTTGCAGGCTTTGCTTAGGGATCCTGCAGTTCACGTATTCTGATGACACCAAAACCCTCCTTCAAAACGACAATCTCCCTCTTCTCATTGCTCAAACCGTTCAACGACAAGCCTATCACTTTCATTCCTTTTCCCTTGAAGTTTCCATCCCACCTATCGTTCTCGACAATGACAACTCTCTTCGGTCATATATGAAAACCAAATACGGGTCCCAACCTTGGTTCCAACAAAACTTGCATATTGGATGCATCTCTGCAAAGGATGCCTTAAAATTTTCTCTCGTATATCCTCTTGAAGATCTTCTGGAATGTAAATCAAGTATGGGCCCTTTCCGCATTCGTTTGACATTCTGTCACGCGAAAGCTTCAAAAGGGGATGAGAAGTGTTCGGATGGTGCTGAGAGTTGCAAGAGAAGAAAAATAGGCGAGTCCAATGCAGTTGGAGAAAGGCCTACTAGCAGTTCTGTTGAAAATGATTCCTCAGACTGCTGTGAATTCTTGCTAGAAAAGGCAAATGAGCCTTGCCATCTTACTTACTTTTGCTACAGGACACCTTTCTATTTTGGTGGAAGATACCTAAAGTATTCACGGAATGTGAGTCAAACACGCTGGATTATTGATGATGAAAGAATGGGAGAAGCATCAGTCGAGGAAATAATTGGTGGAAACATCCTCCAAGCTTGTCAAGGTGATAGTTTTAAGTTTCATGCTGCAGGCAGAGAAGATATCGATGTCCGAATGTTGGGTCCAGGCAGGCCATTTATTGTTGAGGTGCAAAATGCACGACACATCCCATCTGAACTGTCTGTAAAAGATATGGAGAAAACGATAAATAGCATGGAGTTTAGTTTGAATAAATTGGTTAGGGTAAAAAATCTTAAACTTGTTGGTAGTGATGGCTGGAACCTAATGCGAGAAGGTGAAGCAGAGAAGCAGAAACAATATGCTGCTTTGGTGTGGATTTCTCGACCAATAAAGGATGAAGATTTTCAATGTGTTTCTTCTCTCAAGGATTTGAAAGTTTTGCAGAGGACTCCAATAAGGGTGCTACATCGTCGCAGTCCTTTAGAGCGGGAAAAGATTATTCATTGGATGACAATGGAGACAATTGCTGGAAGTTCTCAATATTTTCTTCTGCACTTATGTACACAGGCTGGGACCTACATCAAGGAATTTGTTCATGGAGACCTTGGACGCACCCATCCTAGCATTGGATCAATTTTGGGTTGCAGAGCTGAAATTTTGCAGCTTGATGTCACAGACATCAAAATGGAATGTTTCCTGACCTAA 1470 0.4347 MEKKEDELQEVLRALPSDAVKDLLSHQVCARCILRVFGVQGRAYASPSLSSLFAQHSQTQLCRLCLGILQFTYSDDTKTLLQNDNLPLLIAQTVQRQAYHFHSFSLEVSIPPIVLDNDNSLRSYMKTKYGSQPWFQQNLHIGCISAKDALKFSLVYPLEDLLECKSSMGPFRIRLTFCHAKASKGDEKCSDGAESCKRRKIGESNAVGERPTSSSVENDSSDCCEFLLEKANEPCHLTYFCYRTPFYFGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILQACQGDSFKFHAAGREDIDVRMLGPGRPFIVEVQNARHIPSELSVKDMEKTINSMEFSLNKLVRVKNLKLVGSDGWNLMREGEAEKQKQYAALVWISRPIKDEDFQCVSSLKDLKVLQRTPIRVLHRRSPLEREKIIHWMTMETIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTDIKMECFLT 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00422 489 Gene3D - 373 483 - -
Cca05g00422 489 PANTHER BNAC07G15400D PROTEIN 3 484 - -
Cca05g00422 489 SUPERFAMILY Pseudouridine synthase 369 483 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Cca05g00422 489 PANTHER UNCHARACTERIZED 3 484 IPR039894 -
Cca05g00422 489 Gene3D - 246 372 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00422 05 9187897 9203751 Cca05g00422 05 9187897 9203751 ECH