Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00404 ATGAATAAGCAGGAGAGGGTGGCCCATGGAGCGATTGGGCCGAGCCCAGCCCTAGGCGCAATAGAAAATACAAGCCGTAGAAGAGGGCTTCGCTCTTTGTGTTCGTTCGCAAAGGAAACTCTATCCTTAGATATCGCGATGGATCGGTACCAGAAGGTGGAGAAGCCGAGAGCTGAAACTCCAATCGATGAAAATGAGATCCGGATTACTAGTCAGGGGAGGATGCGCAACTACATTACTTACGCCATGAGCTTGCTTCAGGAAAAAGGGTCTAATGAAATTGTTTTCAAGGCAATGGGGAGAGCTATTAATAAAACCGTAACTATCGTGGAGTTGATTAAGAGGAGAATTGTGGGTCTCCACCAGAATACAGCAATTGGATCCACTGATATCACTGATACTTGGGAGCCCCTAGAGGAAGGCCTCCTTCCTTTGGAGACAACTAGACATGTGTCAATGATAACAATAACCCTTTCAAAGAAGGAACTTGATACATCATCTGTGGGGTATCAGCCTCCATTACCAGCTGATCAGGTGAAGGCTGCTACAGATTTTGATTATGAAGGAGAGGGTTCACCTAATGGTCGTGTTCGAGGACGTGGTGGCCGAGGCAGGGGAAGGGGCAGAGGGAATGGTTATATTTCAGCTGATTACGATGATGGTGGTTGGGATCGTAGTAGGGGAAATGCTAGGGGCAGGGGTAGAGGAAGAGGACGTGGCTTTCGTGGTCGTGGAAGGGGAGGGTACAATGGGCCCCATGTTGATATGCAGCAAGATGGAGGATACAACCAAGATATACCTCAAGGCCGAGGTCGTGGCCGTGGCAGGGGGGGATATCGTGGAAGGGGTCGCGGCTTTAGATCCAATGGGCCAATCCAAGCAGCTGCCTGA 891 0.4983 MNKQERVAHGAIGPSPALGAIENTSRRRGLRSLCSFAKETLSLDIAMDRYQKVEKPRAETPIDENEIRITSQGRMRNYITYAMSLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKKELDTSSVGYQPPLPADQVKAATDFDYEGEGSPNGRVRGRGGRGRGRGRGNGYISADYDDGGWDRSRGNARGRGRGRGRGFRGRGRGGYNGPHVDMQQDGGYNQDIPQGRGRGRGRGGYRGRGRGFRSNGPIQAAA 296
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00404 296 MobiDBLite consensus disorder prediction 185 296 - -
Cca05g00404 296 PANTHER RIBONUCLEASE P SUBUNIT P25 47 292 - -
Cca05g00404 296 SUPERFAMILY AlbA-like 62 175 IPR036882 GO:0003676
Cca05g00404 296 Gene3D - 60 164 IPR036882 GO:0003676
Cca05g00404 296 MobiDBLite consensus disorder prediction 1 20 - -
Cca05g00404 296 Pfam Alba 65 129 IPR002775 GO:0003676
Cca05g00404 296 PANTHER ALBA DNA/RNA-BINDING PROTEIN 47 292 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca05g00404 Cca-Chr5 8805384 8809899 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00404 05 8805384 8809899 Cca05g00404 05 8805384 8809899 ECH