Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00389 ATGAGACCCGATCGAAGTTGGATGTTGCGAAGAGTTGATTGCTTCGGCATTGTAAATGAAGAATTCAGACAAGGGGTTGATGGTTTCATTCGAGTTGCTACAAGAGACTCGAAAATTGTCGATGTATCAGGGCGCATTCCTTGTCCATGCGCAAAATGTAGGAATCGATATTGGGATACTACATTTAATGTGGAAAAACATTTGTATCACCATGGATTTGTCGATGGTTATATGAATTGGACCCTTCACGGTGAGGAGACATGGAGGGATTGTGCATCAACATCTGTTGTCCATGATTGTGTTAATCAGAACAAAAATCCCTATGTGGATATGGTTATGGATGCTGCTAATGGTACATTAAATCCTGAAGTAGAAGATGTAGAAGAGGATCCAAATCCTTCAGTTGCAAAGTTTTTTAATTTGTTAAGGGATGCGGATGAACCTTTATGGAATGGTTGCAAGAAGCATACAAAATTGTCAGCTGTAACACAACTTCTAAACTTGAAGTCAGAGTTTAACATGAGTGTGAGTTGTTATGATCGAATGATTTCCATAATCAAGATTGTTTCTAGCAAAATAGAGGGTGCTGTGAAAGTAGCAGCAAATGTTGTGATTCCAGCAGTGTTGGTGTTTGGAGATTCGATAATGGATACTGGAAACAACAACAACAACTCCCTAACATCAGCTCGCTGCAATTTCCAACCTTATGGCAAAGACTTTCCCGGAAACATCCCTACTGGCCGATTTTCCAATGGAAAGGTTCCATCAGACATTATAGCGGGGGAATTGGGCATAAAAGAGTTTCTACCAGCATATTTGGATCCAAATCTCCAACTTAGTGAATTACCCACGGGTGTGTGTTTTGCATCCGGTGGTGCTGGATACGATCCTTTGACATCAAAACTTGCGACAGCTATACCACTATCGGGTCAACTAGACATGTTCAAAGAATACATAGTGAAGCTTAAAGGACTCGTTGGAGACAACAGAACAAACTTCATTCTCGGCAACAGTCTTTTCCTTGTGGTTTTAGGCAGCAATGACTTTTCCAACACATACTTTTTGTCCCATATCAGAGAATTGCAATATGATGTTCCTGCTTACTCTGAACTTGTGGTTAACTCAGCTTCTAATTTCTTCAAGGAAATATATGATCTAGGAGCACGGAGGATTGCAATATTCAGTGCACCGCCAATTGGGTGTGTGCCGTATCACAGAACATTGGCTGGTGGAATTACAAGAAAATGTGTAGAAAAGTACAACAATGCAATGGTGCTATTTAACGACAAACTGTCCAAGGAGATAGATTCCCTTAATCAGAACCTTCCAAACAGCAGGATTGTTTACTTCGATGTTTACAACCCTTTACTTGACATCATTGTAAACCACCAAAAATATGGTTATGAAGTCGGGGACAAAGGGTGTTGTGGCACGGGCAAAATAGAGGTTGCATTGACATGCAACCATTTGGATGCCACGTGTGCCAACGTTTTGGATTATGTGTTTTGGGACGGTTTTCACCCAACTGAAAGCGTTTATAAAAAGCTTGTGCCCCTTGTTCTTCAAAAATATATGCACCAGTTTGAGTGA 1590 0.4063 MRPDRSWMLRRVDCFGIVNEEFRQGVDGFIRVATRDSKIVDVSGRIPCPCAKCRNRYWDTTFNVEKHLYHHGFVDGYMNWTLHGEETWRDCASTSVVHDCVNQNKNPYVDMVMDAANGTLNPEVEDVEEDPNPSVAKFFNLLRDADEPLWNGCKKHTKLSAVTQLLNLKSEFNMSVSCYDRMISIIKIVSSKIEGAVKVAANVVIPAVLVFGDSIMDTGNNNNNSLTSARCNFQPYGKDFPGNIPTGRFSNGKVPSDIIAGELGIKEFLPAYLDPNLQLSELPTGVCFASGGAGYDPLTSKLATAIPLSGQLDMFKEYIVKLKGLVGDNRTNFILGNSLFLVVLGSNDFSNTYFLSHIRELQYDVPAYSELVVNSASNFFKEIYDLGARRIAIFSAPPIGCVPYHRTLAGGITRKCVEKYNNAMVLFNDKLSKEIDSLNQNLPNSRIVYFDVYNPLLDIIVNHQKYGYEVGDKGCCGTGKIEVALTCNHLDATCANVLDYVFWDGFHPTESVYKKLVPLVLQKYMHQFE 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00389 529 CDD SGNH_plant_lipase_like 206 524 IPR035669 -
Cca05g00389 529 SUPERFAMILY SGNH hydrolase 338 521 - -
Cca05g00389 529 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 168 527 - -
Cca05g00389 529 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 208 219 IPR008265 GO:0006629|GO:0016298
Cca05g00389 529 Pfam Transposase-associated domain 5 85 IPR029480 -
Cca05g00389 529 Gene3D SGNH hydrolase 194 525 IPR036514 -
Cca05g00389 529 Pfam GDSL-like Lipase/Acylhydrolase 208 516 IPR001087 GO:0016788
Cca05g00389 529 PANTHER GDSL ESTERASE/LIPASE EXL3 168 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00389 Cca-Chr5 8488181 8495607 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00389 05 8488181 8495607 Cca05g00389 05 8488181 8495607 ECH
Cca07g00253 07 3186740 3193674 Cca05g00389 05 8488181 8495607 PCT