Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00364 ATGGCCTTCTCTAAAGCTCTACTAGCTTCGGTCCTCATTTGTTTACTCATCATGAATCTTGTGGAATCAAATACAATGGTATTCACAAACATGGTGGAGGGACAAAGTCCCAGCCCTTCCCAGCTAAAGATTGATTGTGATGCTGAATGCAACCGGAGGTGCCGGTTATCGTCAAGGCCAAATCTGTGTAAGAGGGCATGTGGAACGTGTTGTGATCGTTGCAACTGTGTGCCTTCGGGTACCTATGGTCACTACGAAGAGTGTCCATGCTATGAAAATATGACCACCCATGATGGAAGACATAAATGTCCATAA 315 0.4508 MAFSKALLASVLICLLIMNLVESNTMVFTNMVEGQSPSPSQLKIDCDAECNRRCRLSSRPNLCKRACGTCCDRCNCVPSGTYGHYEECPCYENMTTHDGRHKCP 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00364 104 Pfam Gibberellin regulated protein 45 104 IPR003854 -
Cca05g00364 104 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 104 - -
Cca05g00364 104 PANTHER SNAKIN-2-LIKE 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00364 Cca-Chr5 7986841 7987644 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00364 05 7986841 7987644 Cca05g00364 05 7986841 7987644 ECH
Cca07g00270 07 3473693 3474736 Cca05g00364 05 7986841 7987644 PCT