Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00333 ATGGAAACGGTGCTTCCTCGCGTTGGCCTCGGCCTCTGCACTCCGCGCCCAATCCACCCTTCCCGAAAGCCCAACAAACTCCGTTCCTCCTCCGCCTCCCGCGGCGGCGGCTCCCTATCTGCTACCTGTGCCACCAGCAAATGGGCGGAGCGCCTCATTTCCGACTTCCAATTCCTCGGCGACGCCACCTCGAGCGCCGCCGCCCTGAGCCCATCCATCCCGCCGCGACTCGACCCTCCCGAGCGCTACGTGTCGATCCCGCTCGACCTTTACCGCGTCCTCGGCGCCGAATCGCACTTCCTCGGCGACGGCATTCGCAGGGCCTACGAATCCAAATTCTCGAAGCCTCCACAGTACGCGTTCAGCAACGACGCTTTAATAAGCCGCCGCCAAATCCTCCAAGCCGCGTGCGAAACCCTAGCCGACCCTGCTTCTAGAAGAGAGTACAACCAGAGCCTCCTCGACGACGAGGACAACGCCATTCTCACTCAAATCCCCTTCGACAAGGTTCCTGGAGCGTTGTGCGCGTTGCAGGAAGCTGGAGAGACGGAGCTTGTGCTGGAGATTGGGCAGGGTTTGCTTAGGGAGAGGTTGCCGAAGACGTTTAAGCAGGATGTTGTGTTGGCTATGGCGCTGGCTTTTGTTGACGTGTCGAGGGACGCTATGGCTTTGTCTCCGCCGGATTTCATTGCGGCCTGTGAGATGCTCGAGAGAGCATTGAAGCTTTTGCAGGAAGAAGGGGCAACCAGCTTAGCTCCAGATTTACAAGCACAAATAGATGAGACGCTAGAAGAGATAACCCCACATTGTGTCTTGGAACTTTTAGCCTTGCCTCTTGATGATGAACATCGAGTGCGGAGGGAGGAAGGTCTTCTAGGTGTTCGTAACATTTTGTGGGCAGTTGGAGGAGGGGGCGCAGCAGCAATTGCTGGGGGTTTCACACGTGAAGACTTCATGAATGAGGCATTCTTACACATGACAGCGGCTGAACAGGTTGAACTTTTTGTAGCCACTCCAAGTAATATTCCAGCTGAAAGTTTTGAAGCATATGGAGTTGCACTTGCACTGGTTGCACAGGCCTTTGTGGGTAAAAAGCCACATCTTATCCAAGATGCTGATAACTTGTTCCAACAACTTCAACAGACTAAGATTACAACTGTGAGGAATGCACCCTCTGTTTATACTCCCAAGGAGAAGAGAGAGATTGATTTTGCTTTAGAAAGGGGCCTCTGTGCACTGCTTGTTGGGGAGCTTGATCAATGTCGGTCATGGTTGGGACTAGATACTGATAGCTCTCCTTATAGAAACCCATCAATTATAGAATTTATTATGGAGAATGCAAAGGGGGATGAAGACAGTGATCTTCCTGGACTCTGTAAATTGTTGGAGACATGGCTGATGGAGGTGGTTTTTCCCAGGTTTAGAGATACAAAAGAAACCAGATTCAAGCTTGGAGATTACTATGATGACCCAACAGTGCTGCGATATCTAGAGAGGCTGGAGGGTGTTGGCCGTTCACCCTTAGCTGCTGCTGCAGCCATAGCGAAAATTGGAGCTGAGGCTACTGCTGTCATTAGCCAGGTCCAGGCTAGTGTAATAAGTGCATTGAAAAAGGTATTTCCTGTTCGTTCTGAAGGTCAAATTGTGAAACATCAAGAAAATGGTGAGAAGGATGATTTTGGCTTTTCTGAAAGTGTGAATCCTCTGATATTATCAGATCGGGATTCTTCAGCCAATATTGAGGTTCCTGGAATAAAAAATACTGCCGAGACCAGTGAAGGTGAAATTATTACCGATGAAATTAAAAATGCTAGTGTGCAGATCATGTGTGCTGGTGTTGTAATTGGACTTGTAACTATGGTTGGTTTAAAAGTTTTACCTGCTAGGAATGGATCGCCGACGCATAGTAATATGACTGGTTCAGCAATAGCATCAGATACTATCAACTTAGGTTCCTTGGCAGATGAAGAAAAAGGAGAGCAACTACCAAAAATGGATGCAAGGATTGCAGAAGATCTAGTTCGCAAGTGGCAAAGTATAAAATCCCAAGCTTTTGGACCTGACCATTGCCTAGGAAGATTGCATGAGGTATTGGACGGTGAGATGTTGAAGATATGGACAGATCGTGCAGCTGAGATTGCAGAGCGTGGTTGGTATTATGACTACACCTTGGAGGACCTCAACATCGATAGTGTGACCATCTCACAGAATGGGAGGCGTGCAGTGGTGGAAACAACTCTTAAAGAGTCTACTCACCTCAACGCCGTAGGTCATCCACAACACGATGCTTCTAACAGCAGAACCTACACAACAAGATATGAGATGTCTTTCTCAGGTCCAGGGTGGAAAATTGTTGAAGGAGCTGTCCTTGAGTCGTAA 2379 0.4901 METVLPRVGLGLCTPRPIHPSRKPNKLRSSSASRGGGSLSATCATSKWAERLISDFQFLGDATSSAAALSPSIPPRLDPPERYVSIPLDLYRVLGAESHFLGDGIRRAYESKFSKPPQYAFSNDALISRRQILQAACETLADPASRREYNQSLLDDEDNAILTQIPFDKVPGALCALQEAGETELVLEIGQGLLRERLPKTFKQDVVLAMALAFVDVSRDAMALSPPDFIAACEMLERALKLLQEEGATSLAPDLQAQIDETLEEITPHCVLELLALPLDDEHRVRREEGLLGVRNILWAVGGGGAAAIAGGFTREDFMNEAFLHMTAAEQVELFVATPSNIPAESFEAYGVALALVAQAFVGKKPHLIQDADNLFQQLQQTKITTVRNAPSVYTPKEKREIDFALERGLCALLVGELDQCRSWLGLDTDSSPYRNPSIIEFIMENAKGDEDSDLPGLCKLLETWLMEVVFPRFRDTKETRFKLGDYYDDPTVLRYLERLEGVGRSPLAAAAAIAKIGAEATAVISQVQASVISALKKVFPVRSEGQIVKHQENGEKDDFGFSESVNPLILSDRDSSANIEVPGIKNTAETSEGEIITDEIKNASVQIMCAGVVIGLVTMVGLKVLPARNGSPTHSNMTGSAIASDTINLGSLADEEKGEQLPKMDARIAEDLVRKWQSIKSQAFGPDHCLGRLHEVLDGEMLKIWTDRAAEIAERGWYYDYTLEDLNIDSVTISQNGRRAVVETTLKESTHLNAVGHPQHDASNSRTYTTRYEMSFSGPGWKIVEGAVLES 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00333 792 Pfam ARC6-like, IMS domain 670 784 IPR025344 -
Cca05g00333 792 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 27 790 IPR044685 -
Cca05g00333 792 MobiDBLite consensus disorder prediction 24 40 - -
Cca05g00333 792 SUPERFAMILY Chaperone J-domain 87 157 IPR036869 -
Cca05g00333 792 MobiDBLite consensus disorder prediction 15 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00333 Cca-Chr5 7184275 7189789 Dispersed