Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00326 ATGGCTGATTTAGGCTCAGCCTCTTCCAAGAGAATGTGGTGTTCCATTCCAGAAAGAATGCAGCTGCACGTGGCCATGTTGGCCTTGCAGTTTGGCTATGCTGGATTCCATGTGGTCTCAAGAGCTGCACTTAACATGGGTGTTAGCAAGCTTGTTTTTCCAGTCTATAGGAACATCATTGCATTGCTTCTTCTACTCCCCTTTGCCTACTTCTTGGAAAAGAAGGAGAGGCCAACCATGACTTTAAACTTCGTCTGCCAGTTCTTTCTTCTGGCACTTGTCGGGATTACAGCAAACCAAGGTTTCTACTTGCTTGGCTTGGAGAACACTACCCCAACCTTCGCATCAGCAATACAGAACTCAGTCCCAGCCATTACATTCCTCATGGCAGCCATATTCAGAATAGAGCAAGTGAGACTGAACAGAAAAGATGGGTTAGCTAAGGTGGCTGGAACAGTGTTGTGTGTGGTTGGGGCCACCGTGATCACTCTTTACAAGGGTCCAACTATATATAGCCCAGCAACTCGTGTGAACAGCAGCAGCAACATAACACCCCAAATATTTGATTTTGGGTCACTTTCACTGGGAGATGCAAAGGGCAAGAACTGGACCCTAGGGTGCTTATACCTCATTGGACATTGCTTGTCATGGTCTGGTTGGCTTGTGTTGCAAGCACCAGTCCTCAAGAAGTACCCCGCTCGCCTCTCTGTCACTTCCTACACCTGTTTCTTTGGACTCTTGCAGTTTCTAGTCATTGCTTTGGTCCTTGAAAGAGACTCACAGGCTTGGCTTTTCCACTCTGGTGCTGAAGCTTTCACAATATTATACGCGGGAGTGGTGGCATCTGGAATTGCCTTCGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCTGTGTTTGTTGCTGTGTATCAACCTGTTCAGACTTTTGTTGTTGCAATCATGGCTACCATTGCTTTAGGAGAAGAGTTCTACTTGGGCGGGATCATTGGGGCAGTGTTGATTGTAGCGGGACTATACTTTGTCTTGTGGGGTAAAAGTGAAGAGAGGAAATTTGCAAGGGAACAGCTTGCGATTGCTTCCACTGCGGAGCATAGCATCATAAGGCCCGCAAGCCATGCCAAAGCATCACTCAATCAACCACTCCTTTCTTCATCATCAGAAAATGTTTAA 1173 0.4697 MADLGSASSKRMWCSIPERMQLHVAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPTMTLNFVCQFFLLALVGITANQGFYLLGLENTTPTFASAIQNSVPAITFLMAAIFRIEQVRLNRKDGLAKVAGTVLCVVGATVITLYKGPTIYSPATRVNSSSNITPQIFDFGSLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLLQFLVIALVLERDSQAWLFHSGAEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMATIALGEEFYLGGIIGAVLIVAGLYFVLWGKSEERKFAREQLAIASTAEHSIIRPASHAKASLNQPLLSSSSENV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00326 390 PANTHER WAT1-RELATED PROTEIN 14 356 - -
Cca05g00326 390 PANTHER WAT1-RELATED PROTEIN 14 356 IPR030184 GO:0016021|GO:0022857
Cca05g00326 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Cca05g00326 390 Pfam EamA-like transporter family 205 343 IPR000620 GO:0016020|GO:0016021
Cca05g00326 390 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020|GO:0016021
Cca05g00326 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00326 Cca-Chr5 6860032 6863537 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00326 05 6860032 6863537 Cca05g00326 05 6860032 6863537 ECH
Cca05g00326 05 6860032 6863537 Cca07g00317 07 4261424 4264471 PCT