Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00315 ATGCATTTCATCAAAGTCACTCTTGTAATGATAACTTTCCTCTCAGTTAAACTCTCCCATGCGAACCCTGGCTTTCATTTTGGCTGGGGTGGTCATCATGGGGGGATATCTTTTGGTCTTTCACCTCAATTCTATCAGTTTTCATGCCCTCAAGCTAATGACATTGTCATGTCAGTGTTGGACAAGGCCATTGCAAGGGACATGAGAATGGCTGCTTCTCTACTTAGACTTCACTTTCACGATTGCTTCGTGCAGGGCTGCGATGGATCGATTTTGTTGGATGATAGTGCAACAATAGTCAGTGAAAAAAATTCTGGACCTAACAAAAACTCCGTTCGAGGTTTCGAAGTGATTGATGAGATCAAGTCTAAGTTGGAAAAGGCATGTCCTCATACTGTCTCATGTGCTGACATTCTTGCCCTTGCTGCCAGGGGCTCCACTGTTCTTAGTGGAGGACCGAACTGGGAGCTCCCATTAGGAAGAAGAGACTCAAAAACAGCAAGCCTAAGGGGGTCAAACAGAAACATTCCCCCACCAAATGCAACCATTGAAAATCTCCTAACATTTTTCAAGCGTCAAGGCCTTGATGAAGTGGACCTTGTTGCCCTCTCAGGTGCACATACCATTGGGGTGGCAAGATGTGCCACATTCAAGCAGAGACTATACAACCAAAAAGGAAACAACCAACCAGATGAGAATCTAGAAAAATCATTTTACTTTGGTTTGAAGACAATGTGCCCAAAATCAGGAGGTGACAACTTGATTTCTCCCTTGGACTTTGGCTCCCCAAGAATGTTTGATAATACATATTTCAAACTCTTACTTAGGGGAAAAGGACTGCTCAATTCAGATGAAGTGCTTCTTGTGGGAAATGTTAAGGAAACTCGTGAATTGGTCAAAAAATATGCACAAGATGAGAGCCTCTTCTTTGAGCAATTTGCCATGTCCATGATCAAGATGGGGAACCTTCGTCCTCTCACTGGATTTAATGGTGAAGTTAGGAAGAATTGTCGCCGAGTTAATTAA 1026 0.4308 MHFIKVTLVMITFLSVKLSHANPGFHFGWGGHHGGISFGLSPQFYQFSCPQANDIVMSVLDKAIARDMRMAASLLRLHFHDCFVQGCDGSILLDDSATIVSEKNSGPNKNSVRGFEVIDEIKSKLEKACPHTVSCADILALAARGSTVLSGGPNWELPLGRRDSKTASLRGSNRNIPPPNATIENLLTFFKRQGLDEVDLVALSGAHTIGVARCATFKQRLYNQKGNNQPDENLEKSFYFGLKTMCPKSGGDNLISPLDFGSPRMFDNTYFKLLLRGKGLLNSDEVLLVGNVKETRELVKKYAQDESLFFEQFAMSMIKMGNLRPLTGFNGEVRKNCRRVN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00315 341 SUPERFAMILY Heme-dependent peroxidases 39 341 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 Gene3D - 44 341 - -
Cca05g00315 341 CDD secretory_peroxidase 39 340 IPR033905 GO:0004601|GO:0042744
Cca05g00315 341 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 PRINTS Plant peroxidase signature 257 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 PRINTS Plant peroxidase signature 273 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 PRINTS Plant peroxidase signature 315 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 PRINTS Haem peroxidase superfamily signature 259 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 PANTHER PEROXIDASE 72-RELATED 24 340 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Cca05g00315 341 Pfam Peroxidase 58 305 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g00315 341 PANTHER PEROXIDASE 24 340 - -
Cca05g00315 341 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Cca05g00315 341 Gene3D Peroxidase, domain 2 177 321 - -
Cca05g00315 341 ProSiteProfiles Plant heme peroxidase family profile. 39 341 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00315 Cca-Chr5 6628348 6630966 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00315 05 6628348 6630966 Cca05g00315 05 6628348 6630966 ECH