Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00313 ATGGAAGACTATGTTATAAAGACAATTGTTGTTGGGGTAGTGTCATGGACATCAGCTTTTGTGATAGCGAGAAGAATAATATTTCCCAAACGCTCTTTTGATTTCTGCAACCGCGTTGTGTCCACTCTCCATGCAACTTTGGCAGTAACATTGGCTTGGCTCTCTGTTGAAGATTGGAGGTGTCCAATCTGTCCTGTGGGTTCAAAATCTTCACCCAAACAGATGCAAGTCCTAGCAGTGAGTCTTTCTTATCTCATTTATGATCTTGCTTGTTGTCACTTTGGTGAAAGAGTCACTCTAGATAACACAGTCCACCATTTGGTAAGCATTGTTGGTATTGGAGCAGGTCTTTCCTATCAGAAGTGTGGCTCAGAAATGGTAGCAACAATATGGATAACAGAGATATCAAGCCCATTCTTGCATTTAAGGGAGCTTTTAAAAGAGCTTGGTTACAGAGATACCCTCCTTAATTTGGTTGCTGACATTCTATTTGCTGCCATATTTACATTTGCTAGGATGGTGGTCGGACCGTGTATCACATACGTAACTTTATCAGCCAACTATCCACTTCTCATAAAGGCTATGGGATTGGGTTTGCAGCTGGTAAGTGCATTCTGGTTCTTCAAAATTGTAAGAATGATAAAACACAAATTAACCAAGAGAACAACAAAAAAAGAGGTGAACCACGCCAACAACGCGACGGAGACTGCCAACTCAAAGTTGCACCGAAGTTAG 735 0.4136 MEDYVIKTIVVGVVSWTSAFVIARRIIFPKRSFDFCNRVVSTLHATLAVTLAWLSVEDWRCPICPVGSKSSPKQMQVLAVSLSYLIYDLACCHFGERVTLDNTVHHLVSIVGIGAGLSYQKCGSEMVATIWITEISSPFLHLRELLKELGYRDTLLNLVADILFAAIFTFARMVVGPCITYVTLSANYPLLIKAMGLGLQLVSAFWFFKIVRMIKHKLTKRTTKKEVNHANNATETANSKLHRS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00313 244 PANTHER - 2 227 - -
Cca05g00313 244 SMART lag1_27 30 219 IPR006634 GO:0016021
Cca05g00313 244 MobiDBLite consensus disorder prediction 225 244 - -
Cca05g00313 244 Pfam TLC domain 34 212 IPR006634 GO:0016021
Cca05g00313 244 ProSiteProfiles TLC domain profile. 30 219 IPR006634 GO:0016021
Cca05g00313 244 PANTHER TRANSMEMBRANE PROTEIN 136 2 227 IPR042512 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00313 05 6618085 6623201 Cca05g00313 05 6618085 6623201 ECH