Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00308 ATGAACGTGAGACGCATTAGAAGTGAATTTTGGGGTCTCGGTGGTGCCAAGGCTAAACCCGGTTTTCTTTCTTGCCATATAAACACACGAAGGTTCAAAACTGTGCATTGTAGTTTTAACTCACCCACCAATGACAACGGAAGTTCCGCGGATAATTTCAATGAAAAAGATGAAGATTATGTTAACTCTAGTGTGATTGAAGCTGTTGAGGTGAAGAGTGGAGTGGATGGTTTCATAATCAAAATGAGGGATGGAAGACACTTAAGATGTGTCCATAACAATCCTCAGGGAGGACATCTTCCAGATTATGCACCACATCCTGCTATTGTATTGAAGATGGAAGATGGGACTGGTCTACTTCTTCCTATAATTGTTTTGGAGATGCCAAGCATCTTACTAATGGCAGCAATACGCAACGTTCCCATAGCTAGACCTACTTTATATCAAGTAGTAAAGGAGATGATTGACAAGATGGGTTACGAAATCAGACTTGTCAGAGTTACCAGGAGAGTACATGAGGCATACTTTGCCCAGTTGTTTCTTACGAAGGTTGGAAATGAGGCAGAATGTGTGAGCTTTGATCTTCGCCCTTCAGACGCTATCAATATTGCAGTAAGATGCAAGGTTCCAATACAAGTCAATAAATACCTGGCATACAGTGATGGTATGAGAGTAATTGAATCAGGCAAATTGTCAACACAGTTCCATGGTTTGGATGGCCAATTATTTACTGAAATGGACCGGCCAAGTGATCAGCCTTGCACTGAGACCGCAGAATTCAATCTTTTGCATAACATGTTGAAAGCTGTTGTTGAAGAGCGCTATAAAGATGCTGCTTTGTTCAGGGACAAACTTAATCAACTTAGGTCGGGAAAAAACGTGAATAACAGATTCTGA 897 0.4114 MNVRRIRSEFWGLGGAKAKPGFLSCHINTRRFKTVHCSFNSPTNDNGSSADNFNEKDEDYVNSSVIEAVEVKSGVDGFIIKMRDGRHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSILLMAAIRNVPIARPTLYQVVKEMIDKMGYEIRLVRVTRRVHEAYFAQLFLTKVGNEAECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTQFHGLDGQLFTEMDRPSDQPCTETAEFNLLHNMLKAVVEERYKDAALFRDKLNQLRSGKNVNNRF 298
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00308 298 ProSiteProfiles Bifunctional nuclease (BFN) domain profile. 90 225 IPR003729 GO:0004518
Cca05g00308 298 PANTHER VON HIPPEL-LINDAU PROTEIN 1 295 - -
Cca05g00308 298 PANTHER NUCLEASE IN BASAL DEFENSE RESPONSE PROTEIN 1 295 - -
Cca05g00308 298 Pfam Bifunctional nuclease domain 109 219 IPR003729 GO:0004518
Cca05g00308 298 Gene3D Bifunctional nuclease domain 96 230 IPR036104 GO:0004518
Cca05g00308 298 SUPERFAMILY Hypothetical protein TM0160 90 228 IPR036104 GO:0004518
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca05g00308 Cca-Chr5 6516356 6519846 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00308 05 6516356 6519846 Cca05g00308 05 6516356 6519846 ECH