Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00305 ATGCAAACAGACCGAAGGAAGGAAATGGAAACCCTCGAAATACTTCACATGAACAAAGGCGCAGGCGAAACTAGCTACGCCATGAACTCCTCCGTTCAGAATAAGATTATCTCTGCAGCAAAGCCAGCAACAAAGAAAGCTATTGTGCAAATTCTGTGTTCAAGTTTGCCAGAAAAGATGGGCATTGCAGACTTGGGTTGTTCCTCTGGGCCGAATGCGTTAAGGGTGATATCTGAGATAGTGGATGATGTGTATTCCACCTCACGCCTCTTGGATCGGCCAATGCCTGAGTTGGTGGTGTATTTGAATGACCTTTACACGAATGACTTCAACAACATATTTGGCTCATTGCCTTCTTTCTACAGAAAGCAGAAGCAAGAAAAGGGAAGTGGCTTTGGATCTTGTTTTATTTCAGCAGTCCCTGGAACTTTCTATGGCAGGCTTTTCCCAAGCAATAGCCTCCACTTTGTCCACTCTTCTTCCAGCCTCCATTGGCTTTCTCAGGTTCCTGGTGGTTTGGAGGATGGTTGTGGGAGAGCACTGAACAAGGGAAAGATCTACATATCAAAGAGCAGTCCTGAGTGCGTTTTGGATGCTTATTCTGAGCAATTCAAAAGTGATTTTTCAGTGTTTCTGGCTTCACGTTCACAAGAGATGGTAAGTGGAGGACGCATGGTGTTGTCTCTTATTGGTAGGGAATCCATGGATCCAACCACTGGCCATAGTTGCTATCAGTGGGAGCTGTTGGCACGCTCTCTCATGACCATGGTTTCTGAGGGTCTTGTAGAAGAGGAGAAGGTGGATTCTTTTGACGCTCCGTACTATGCACCATGTTTGGAGGAAGTGAAATCGGAGATTCAAAAGGAAGGGTCATTCATGGTGGATGGGCACGAGGCTTATGAAATCGATTGGGACGGTGGAATGGAAATGGAAGGTGATGCTTCTCCATTGTCAAGAGGAGAACGAGTGGCTAGGACCATTAGGGCAGTGGTTGAGTCCATGTTTGAATGGCATTTCGGGTGTCACATAATGGATGAGCTGTTTCGAAGGTATGCAGAAATTGTAGAGGAGCATTTATCCAAGACTAGGACCAGATACATCAATTTGGTCATTTCCCTCATCAAGCCAAGTTGA 1134 0.4577 MQTDRRKEMETLEILHMNKGAGETSYAMNSSVQNKIISAAKPATKKAIVQILCSSLPEKMGIADLGCSSGPNALRVISEIVDDVYSTSRLLDRPMPELVVYLNDLYTNDFNNIFGSLPSFYRKQKQEKGSGFGSCFISAVPGTFYGRLFPSNSLHFVHSSSSLHWLSQVPGGLEDGCGRALNKGKIYISKSSPECVLDAYSEQFKSDFSVFLASRSQEMVSGGRMVLSLIGRESMDPTTGHSCYQWELLARSLMTMVSEGLVEEEKVDSFDAPYYAPCLEEVKSEIQKEGSFMVDGHEAYEIDWDGGMEMEGDASPLSRGERVARTIRAVVESMFEWHFGCHIMDELFRRYAEIVEEHLSKTRTRYINLVISLIKPS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00305 377 Gene3D - 14 362 IPR042086 -
Cca05g00305 377 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 13 371 IPR005299 GO:0008168
Cca05g00305 377 PANTHER OS01G0701700 PROTEIN 13 371 - -
Cca05g00305 377 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 375 IPR029063 -
Cca05g00305 377 Pfam SAM dependent carboxyl methyltransferase 47 375 IPR005299 GO:0008168
Cca05g00305 377 Gene3D Vaccinia Virus protein VP39 29 363 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00305 Cca-Chr5 6448774 6452271 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00305 05 6448774 6452271 Cca05g00305 05 6448774 6452271 ECH