Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00301 aTGGGTTCAGTATCCGAAACCGTGTGCGTTACAGGAGCTGCTGGTTTCATCGGTTCATGGCTTGTCATGAGACTCCTCGAGCGTGGCTACACCGTTCGAGCCACCGTCCGCGACCCAGCTAACATGAAGAAGGTGAAGCATTTGCTCGATCTGCCACAAGCAAAGACACACCTATCTCTATGGAAGGCTGATCTTGCTCATGAGGGAAGCTTCGATGCAGCCATTAAAGGCTGCACTGGAGTTTTCCACGTCGCCACACCAATGGATTTTGAGTCCAAGGACCCTGAGAACGAAGTGATAAAGCCTACAATAAACGGAGTACTAGACATCATGAAAGCGTGCTTGAAGGCAAAAAGTGTGCGAAGGTTAGTATTCACGTCTTCAGCTGGAAGCCTCAACGTTGTTGAGCACCCAAAGCCATTGTATGACGAGACTTGTTGGAGTGACGTTGAGTTTTGCAAGAGAGCTAAGATGACTGGTTGGATGTATTTCGTGTCTAAAACCATGGCGGAGAAAGAAGCATGGAAATTTGCCAAAGAACATGGCTTGGACTTCATCACTGTCATTCCACCTCTTGTGGTTGGCCCCTTTCTCATGCCAACAATGCCACCGAGCCTTATCACTGCTCTTTCGCCTATAACTGGAAACGAGGGCCATTATTCGATCATAAAGCAAGGTCAATTCGTGCACTTAGATGATCTGTGTCTTGCTCACATATTTCTGTTTGAACAGCCAAAAGTTGAAGGGAGGTACATATGCAGTGCATGTGACACTACTATTCATGAGATTGCCAAATTACTTAATGAAAAATACCCAGAATACAATGTCCCCACCAAGTTCAAGAATATTCCAGAAGAATTGGAGCTTGTGAGATTTTCTTCGAAGAAGATCACGGACTTGGGATTCAAATTCAAATATAGCTTAGAGGATATGTACATCGGAGCAGTTGAGTCATGCAGAGAGAAAGGGCTTCTTCCTAAACCTGCAGAAGCTCCACTCATCAGTGGCTTCGTTGAGAAGAAAACAGAAACTTCAGTGAATGGCGTCATTCACAAATAA 1059 0.4523 MGSVSETVCVTGAAGFIGSWLVMRLLERGYTVRATVRDPANMKKVKHLLDLPQAKTHLSLWKADLAHEGSFDAAIKGCTGVFHVATPMDFESKDPENEVIKPTINGVLDIMKACLKAKSVRRLVFTSSAGSLNVVEHPKPLYDETCWSDVEFCKRAKMTGWMYFVSKTMAEKEAWKFAKEHGLDFITVIPPLVVGPFLMPTMPPSLITALSPITGNEGHYSIIKQGQFVHLDDLCLAHIFLFEQPKVEGRYICSACDTTIHEIAKLLNEKYPEYNVPTKFKNIPEELELVRFSSKKITDLGFKFKYSLEDMYIGAVESCREKGLLPKPAEAPLISGFVEKKTETSVNGVIHK 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00301 352 Pfam NAD dependent epimerase/dehydratase family 8 246 IPR001509 -
Cca05g00301 352 PANTHER DIHYDROFLAVONAL-4-REDUCTASE 2 2 334 - -
Cca05g00301 352 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 334 - -
Cca05g00301 352 CDD FR_SDR_e 8 302 - -
Cca05g00301 352 Gene3D - 1 335 - -
Cca05g00301 352 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 320 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00301 Cca-Chr5 6310162 6315793 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00301 05 6310162 6315793 Cca05g00301 05 6310162 6315793 ECH