Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca05g00286 | ATGGAACCTTCCACTTCTTCCTACAAGATTATACTAGGTTCATCCTCAGTCGCGCGCCGCAAGATATTATCCGAAATGGGATACCAATTCACACTAATGACTGCAGATATTGATGAAAAGAGCATCCGGAAGGAATCTCCGGAAGAGTTAGTTATGGCTCTCGCCGAAGCCAAGGCAGAAGCCATCTTACAAAGGCTCCCTGTTGATGACTACTTAAAGGATGCTGAGCCAACGTTATTAATTACCTGTGACCAAGTGGTGGTGTATGAAGGTGTGATTAGGGAAAAGCCAGCTGGCAAAGAAGAAGCTCGACAATTCTTGAAAGATTATTCTGGAGGGCGTGCTGCCACAGTGAGTTCTGTACTAGTTACTAACCTCAAAACAGGATTGAGAAAGGGAGAATCAGATCGTGTGGAGATAAATTTCAATGAAATACCTGAAGAAATCATTGAGAAGCTGGTTGATGAGGGAGTTACTCTCAATGTTGCCGGGGGCCTGCTAATAGAGCACCCTTTAATACTGCCGTTTGTCAAAGAAGTGGTAGGGACAACGGACAGTGTGATGGGACTCCCCAAAAGTCTGACTGAGAAACTGTTGAAGGAGGCCCTGTAG | 612 | 0.4526 | MEPSTSSYKIILGSSSVARRKILSEMGYQFTLMTADIDEKSIRKESPEELVMALAEAKAEAILQRLPVDDYLKDAEPTLLITCDQVVVYEGVIREKPAGKEEARQFLKDYSGGRAATVSSVLVTNLKTGLRKGESDRVEINFNEIPEEIIEKLVDEGVTLNVAGGLLIEHPLILPFVKEVVGTTDSVMGLPKSLTEKLLKEAL | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca05g00286 | 203 | Pfam | Maf-like protein | 9 | 201 | IPR003697 | GO:0047429 | |
| Cca05g00286 | 203 | PANTHER | MAF-LIKE PROTEIN | 4 | 202 | - | - | |
| Cca05g00286 | 203 | PANTHER | BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED | 4 | 202 | IPR003697 | GO:0047429 | |
| Cca05g00286 | 203 | Gene3D | - | 3 | 202 | IPR029001 | - | |
| Cca05g00286 | 203 | Hamap | dTTP/UTP pyrophosphatase. | 9 | 203 | IPR003697 | GO:0047429 | |
| Cca05g00286 | 203 | SUPERFAMILY | ITPase-like | 7 | 201 | IPR029001 | - | |
| Cca05g00286 | 203 | PIRSF | Maf | 1 | 203 | IPR003697 | GO:0047429 | |
| Cca05g00286 | 203 | CDD | Maf | 10 | 199 | IPR003697 | GO:0047429 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca05g00286 | Cca-Chr5 | 6090397 | 6095134 | Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca05g00286 | 05 | 6090397 | 6095134 | Cca05g00286 | 05 | 6090397 | 6095134 | ECH |