Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00261 ATGGCGCCCTCGCAAAAAGGCAGGTTTTTTCTCTTATCTTTGCTCTTCGTTTTTTCTTCTCTCTATGTTTTTTGTGCCCCCATAGACTCTGAATCATGTTCAATACAATCCAAGCTCGACCACGATTCATGTCAGGAACCTCTTCAGGTTCCTCGACCACACCAAACAACTAATCATTTGCATCAACAAAATTTGTTGGATAAACTCGAGGAGTTAGTCAGAAATCTTAGTGATATAGTTGCGAGATTAGAATCAAAGCTACCTGACCCTCCAAAAGAAAAGGGTAGGTTTGCTCGAATGAAGGGTGGTGATGATATTGATGATGTAAGATCAACTGGTAAGGATTTTGAAGAAGGGGAATTTGAGGGAAAAATCCGAGACGGGGAGAGAGCTAAGGGAATGTCTGTGACAAAGTTCACACCCTTTTGGTCAGAGAGGTTTCAATTTACAAGTGCTGTGAAGTTGGATTCTGATGCCACGTGCATAAATGTTTTGCCTTTTAGGGACCACGAGGGGTTGAGTAAGTATGTGGCGGTTAGTGATGAGAGGGGAAGAGTGTATGTGTTTTTGAGGAATGGAGATGTGTTGGTTGAGTTTGATACCTCGTTGGAGTCCCCTGTTACGGCAATGGTTTCGTATACTTCGGTTTATAAGAACGAGAGTTTTGTGGTAACTGGTCATGAAAATGGGGAAATCTTGATGCATAGAGTTTGGGAGGGAGGGTCTAGTGGAGAGGATTATAGTTCTCTTTTCATGGAGAATGTTGGTAGGTTTGTGTTGCCTGAAAACCGTGAAGATCGGTTGCCGGTGACACTCTTGGAAGTTCATTATGTAGGGAGGATGAAGTACATTCTGTCAGCTGATACAAGTGGGAAGATCAAGGTCTTTAAGGAGAACGGTTCGTTTTATGGTTCTGCCACTCCATCTAGTAGGCCTCTAGTTTTCTTGAAGCAAAGGCTCATGTTCTTGACAGAAACTGGGGCAGGTTCATTGGATTTAAGGGGCATGAAAGTCAGGGAAGCTGAATGTGAAGGACTAAACCATTCTGTTGCTAGAACTTATGTCTTTGATGCCATGGAGCGTTCCAAAGCTTATGGTTATACCTCAGATGGGGATCTGATTTATGTCTTGTTGCATGGAGATGTGATGAACTTCAAATGCAGGGTTAGATACAAGAAAAAGTTTGATATGGATCAGCCTCTTGCTCTGCAGGCAATTAAGGGGTATTTGCTGATTGCTAACCCGGAAAAGGTTTCTGTGTATAATGTTTCATCTCCTCATTATGTGAGAGTTGGCGTGCCAAGAACTGTTTTCTCCTCGAGTCTTGATGAGCTTAGATCATCATTCTTGAATCATCCAAACCCAGGTTTGGATGCAGAAACAAGAGTAATACCCTTGATAGCTAGTGACCGTGAAAAGCTTGTTATTGTTGGGCTTGGAGGTGGTTATGTTGGAATGTATCATTCTAATCTACCTATCTTCAAAGGAGAATTCAATACCATGCTATGGACTAGCCCTGTGTTGTTCTTCATACTTTTTCTTTTTGGGGCTTGGCACTTTTTTGCCAAGAAGAAGGAAGCACTTACATCTTGGGGACCAGATGATCCTTTTAGCTCCACGTCAGCTACCACTGGTGCGCCGATGGCATCCGGTTCCGGAGACAGATCTTTCGCAGACTCTTCTTCGAGAAGTTCGGAAGTTATGGATCTCAGAGGTGGAAATCTCAGAGCTCCACCACCAAGAAGGTATGGCTCTCCCTCAAGGTATTCTGGTGGGGCAGCAAGTGCCTATAGACTTGGTGGTAATGCTGATCACAATGCTAGGCCGGCTTCGGTTGATCCAGATTTTCGTGCAACGGAGCTAAAGTATAGGGCCTCCACCATGGACCCTCCGGGTTTTCCTAAAAGAAGAGATGGCATGTTTGTAGCAAACCAAGTTGTAAATGATCGCAGTTGA 1956 0.4381 MAPSQKGRFFLLSLLFVFSSLYVFCAPIDSESCSIQSKLDHDSCQEPLQVPRPHQTTNHLHQQNLLDKLEELVRNLSDIVARLESKLPDPPKEKGRFARMKGGDDIDDVRSTGKDFEEGEFEGKIRDGERAKGMSVTKFTPFWSERFQFTSAVKLDSDATCINVLPFRDHEGLSKYVAVSDERGRVYVFLRNGDVLVEFDTSLESPVTAMVSYTSVYKNESFVVTGHENGEILMHRVWEGGSSGEDYSSLFMENVGRFVLPENREDRLPVTLLEVHYVGRMKYILSADTSGKIKVFKENGSFYGSATPSSRPLVFLKQRLMFLTETGAGSLDLRGMKVREAECEGLNHSVARTYVFDAMERSKAYGYTSDGDLIYVLLHGDVMNFKCRVRYKKKFDMDQPLALQAIKGYLLIANPEKVSVYNVSSPHYVRVGVPRTVFSSSLDELRSSFLNHPNPGLDAETRVIPLIASDREKLVIVGLGGGYVGMYHSNLPIFKGEFNTMLWTSPVLFFILFLFGAWHFFAKKKEALTSWGPDDPFSSTSATTGAPMASGSGDRSFADSSSRSSEVMDLRGGNLRAPPPRRYGSPSRYSGGAASAYRLGGNADHNARPASVDPDFRATELKYRASTMDPPGFPKRRDGMFVANQVVNDRS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00261 651 PANTHER OS06G0115200 PROTEIN 1 650 IPR045288 -
Cca05g00261 651 SUPERFAMILY WD40 repeat-like 154 297 IPR036322 GO:0005515
Cca05g00261 651 MobiDBLite consensus disorder prediction 539 590 - -
Cca05g00261 651 Coils Coil 62 86 - -
Cca05g00261 651 MobiDBLite consensus disorder prediction 539 568 - -
Cca05g00261 651 MobiDBLite consensus disorder prediction 91 112 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00261 05 5548912 5551379 Cca05g00261 05 5548912 5551379 ECH