Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00259 ATGGAGTCCGAACTCCAAAACCTGGATTCAAAAccgccgaagccgccgccgccgccgcgcgctccggctagtgatgaccgccctctcctcaagtccgccaccgccgccgccgcctccgacgAGCTCGAGAAGAAATTCGCGGCGTTCGTGCGGCGCGACGCCTACGGCGCCATGGGACGCGGCGAGCTGCCGACGCGGGAGAAGGTGCTGCTCGGCGTGGCGCTCGTGACGCTGGTCCCGGTCAGGGTGGTCGCCGTCGCCACCATCCTCGTGCTCTATTACATGATTTGTAGGGTTTGCACGATGCACTCCGTTCCCAATCGCGAGGACGAGCACCAGGAGGATTACGCGCACCTCGTTGGGTGGCGGAGGGTCGTCATTGTTCAGTGCGGGAGAGCCCTCTCCAGGCTCATGCTCTTCAAGGAAAACAATGCTCAGCCTGAAGACACGAGTAGACCTGGTGTTATAATATCTAATCATGTGTCGTATTTGGATATTTTGTATCACACATCTTCCACATTCCCAAGTTTCGTTGCTAAGAGATCAGTGGCTAAACTTCCTCTTGTTGGTCTCATCAGTAAGTGCCTTGGTTGCGTCTTGGTTCAACGGGAATCGAAGTCATCGGACTTTAAGGGTGTTTCAGCTGTTGTCACTGAAAGAATTCGAGAAGCTCATCAAAATACATCTGCTCCAATAATGATGTTATTTCCAGAAGGTACAACCACAAATGGGGAGTTTCTCCTTCCATTCAAGACTGGTGGATTTTTAGCAAAAGCACCAGTACTTCCTGTAATTTTAAGTTATCATTACCAGAGATTTAACCCTGCCTGGGAATCCATATCTGGTGTGCGCCATGTGATTTTTATTCTCTGTCAGTTTGTAAATTATATGGAAGTGACACAGTTACCCACTTACTATCCCTCACAGCAGGAGCAGGATGATCCCAAACTATATGCTAATAATGTTAGAAGGCTGATGGCAAGTGAGGGTAATTTGATACTTTCAGATATTGGGCTAGCTGAAAAACGAATGTATCACGCTGCCCTCAATGGTTTGTTTTCCCAATGCTAA 1071 0.4388 MESELQNLDSKPPKPPPPPRAPASDDRPLLKSATAAAASDELEKKFAAFVRRDAYGAMGRGELPTREKVLLGVALVTLVPVRVVAVATILVLYYMICRVCTMHSVPNREDEHQEDYAHLVGWRRVVIVQCGRALSRLMLFKENNAQPEDTSRPGVIISNHVSYLDILYHTSSTFPSFVAKRSVAKLPLVGLISKCLGCVLVQRESKSSDFKGVSAVVTERIREAHQNTSAPIMMLFPEGTTTNGEFLLPFKTGGFLAKAPVLPVILSYHYQRFNPAWESISGVRHVIFILCQFVNYMEVTQLPTYYPSQQEQDDPKLYANNVRRLMASEGNLILSDIGLAEKRMYHAALNGLFSQC 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00259 356 Pfam Acyltransferase 148 265 IPR002123 GO:0016746
Cca05g00259 356 SMART plsc_2 154 269 IPR002123 GO:0016746
Cca05g00259 356 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 27 352 - -
Cca05g00259 356 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 140 336 - -
Cca05g00259 356 PANTHER PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE FAMILY PROTEIN-RELATED 27 352 - -
Cca05g00259 356 CDD LPLAT_LPCAT1-like 132 343 IPR045252 GO:0008374
Cca05g00259 356 MobiDBLite consensus disorder prediction 10 24 - -
Cca05g00259 356 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00259 Cca-Chr5 5524229 5532489 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00259 05 5524229 5532489 Cca07g00377 07 4896223 4902514 PCT