Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00257 ATGGCAGGTCGTAGAGACGCACTTCTGACGAGAGAGAAGGGCCAATCAGCCGTTGGATCTCGAATCGTCGGCGCCGTCGTCCTCGGCGTTCTCATCGGCTGCGTCTTTGCCTTCTTCTCTCCCAATGGGTTCTTCACCTCCGCTCCCACTCCTCCTCACATTCGCAACCCTAATTCTAAGATGGTTTCATCTGCATGTGAATCGCCAGAACAAGTTAATGCGCTTAAAGTAGATATTCTATCAGCGAAAGAGAAGAATTCCGAGTTGAAGAAGGAGGTAAAGTCGCTTATGGAGAGGCTGCGTTTGGCTGAGCAAGGAAAGGGTCATGCACAGGAACAGTTTGTTGTGCTCGGTGAGAACCACAAGGCTGGGCCTTTTGGCACTGTCAAGGCCCTGAGAACCAATCCACCTGTCATTCCTGATGAATCTGTGAACCCCAGATTGGCCAAGATCTTGGGGGAAGTTGCTATTTATAAAGAACTTGTTGTTGCTCTTGCCAACTCTAATGTGAAGGAGATGTTGCAGCTGTGGTTCACCAACATCAAGAGGGTTGGCATACCTAATTATCTGGTTGTTGCCTTAGATGATAGCATTGAAGAGTTCTGCAAATCCAATGATGTTCCTGTATATAGAAGAGATCCTGATCAAGGTGTTGATGCAGTCGGGGAAAGTGGTGGTAACCATGCTGTTTCCGGGTTGAAATTTCGTATTTTGAGAGAATTTCTGCAACTGGGTTACAGCGTTCTTCTCTCGGATGTTGATATTGTGTACTTGCAGAACCCCTTTGATTATCTTTACAGGGATTCAGATGTGGAGTCTATGTCTGATGGTCATAATAATATGACAGCTTACGGATATAATGATGTCTTTGATGAACCCTCAATGGGTTGGGCTCGGTATGCTCATACCATGAGAATATGGGTTTATAACTCTGGTTTCTTCTACATAAGGCCTACTATTCCTTCAATTGAGCTCTTGGATCGCGTTGCAAAGCGGCTCTCTGATCCAAAATCGTGGGATCAGGCAGTTTTTAATGAGGAGCTCTTTTTCCCTTCACATCCCGATTATGATGGAGTTCATGCTGCAAAAAGGACGATGGATATGTACCTTTTCATGAACAGCAAGGTTCTCTTTAAGACTGTTAGAAAAGATGCTAAACTTAAGAAGCTGAAGCCAGTGATTGTACATGTTAATTACCATCCTGATAAGTTTGCAAGGATGAAGGCAATAGTTGAATTCTATGCCAATGGGAAACAGGATGCGCTGGATCATTTCAAAGACGGTTCTGATTGA 1293 0.4462 MAGRRDALLTREKGQSAVGSRIVGAVVLGVLIGCVFAFFSPNGFFTSAPTPPHIRNPNSKMVSSACESPEQVNALKVDILSAKEKNSELKKEVKSLMERLRLAEQGKGHAQEQFVVLGENHKAGPFGTVKALRTNPPVIPDESVNPRLAKILGEVAIYKELVVALANSNVKEMLQLWFTNIKRVGIPNYLVVALDDSIEEFCKSNDVPVYRRDPDQGVDAVGESGGNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDYLYRDSDVESMSDGHNNMTAYGYNDVFDEPSMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVAKRLSDPKSWDQAVFNEELFFPSHPDYDGVHAAKRTMDMYLFMNSKVLFKTVRKDAKLKKLKPVIVHVNYHPDKFARMKAIVEFYANGKQDALDHFKDGSD 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00257 430 Pfam Nucleotide-diphospho-sugar transferase 186 404 IPR005069 -
Cca05g00257 430 SUPERFAMILY Nucleotide-diphospho-sugar transferases 162 377 IPR029044 -
Cca05g00257 430 PANTHER GLYCOSYLTRANSFERASE 1 430 - -
Cca05g00257 430 PANTHER ARABINOSYLTRANSFERASE RRA3 1 430 IPR044290 GO:0016757|GO:0080147
Cca05g00257 430 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Cca05g00257 430 Coils Coil 72 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00257 Cca-Chr5 5507264 5509576 Wgd