Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00250 ATGGCGCTTAGGAAACTCCTCACCAAGCGTTTCTTCGAAGGTACCAAAACGACGATGCCGTTTGAGCACAAAGTTGTGTCGTCTCCGCCTCTCCAACAGGCGGTATCGCCGCCGAGTGCGCCGCAACCGAGCTCCACCGCCGATGGAGGATTCCTCCGACAGTTCTTCTTCCGGCGAGCCGTGTACCACTCCGCTCCGACGAGGCTGCCGGAGGTCCTGACTCTCCCGGTCGGAGAGCGGCTCCGCGAGAAGCTCAAAGGCATCAACAGCACCGCCGGAGATCGTCTCCGTCTCGGCGGCGTGGCTCCGGCGGAGCCAGGCATCGGAATGTCTGCGAACGACGCGAGGAAGATTCTGAGAGCGACGCAAATGGAGAAGGTGAAGGCGAGGCTGAGGAATGTTTCAGAAAGTTCCATTCCGTTCTCTGAGTTCTTGCGGATCTGCGTGGAGGCTTGCGAGAATCGTGAACAAGGTGCTGAGTTCGCGAAGATCTTGGATGACTCCGGAAACGTCATCGTTTTGGGAAACGCCGTTTTTCTCCGGCCGGAGCAGGTGGCAAAATCAATAGAGAGCTTAATCTATCAATCAATAGCCAACCCAAACGATCCAAGAAGGAAGGAGCTAGAGCAGATGGAGAAGCAGAAGGGTGTTATTGATGACAAGGCTAAGGCCCAGGTCCGGGCCGAGCTTTATTTTGGACTGGGCTTTTTGACAGTTCAGACCCTTGGATTCATGAGGCTCACTTTCTGGGAGCTAAGCTGGGACGTGATGGAGCCCATATGCTTCTTCACTACCTCCATGGGCTTCGCTCTTGCGTATCTTTTCTTCCTCAAAACTTCTGCAGAACCCACCTTTCAAGGCTTCTTCTATTACCGGTTCAAAGTCAAGCAAGAGCGTCTCATGAAGACGCACAACTTCAACATGAGTAGGTACAACGAGCTATGTAAGGCATGCTATCCAAGTTATCATCATGGTGGTGTTAATGAGAACTCTGAACCTTCTCCATCCTTCCACCACCACCCAGGGGAAGCACATGTAAGAGCCTTGCATCGTTAA 1056 0.5331 MALRKLLTKRFFEGTKTTMPFEHKVVSSPPLQQAVSPPSAPQPSSTADGGFLRQFFFRRAVYHSAPTRLPEVLTLPVGERLREKLKGINSTAGDRLRLGGVAPAEPGIGMSANDARKILRATQMEKVKARLRNVSESSIPFSEFLRICVEACENREQGAEFAKILDDSGNVIVLGNAVFLRPEQVAKSIESLIYQSIANPNDPRRKELEQMEKQKGVIDDKAKAQVRAELYFGLGFLTVQTLGFMRLTFWELSWDVMEPICFFTTSMGFALAYLFFLKTSAEPTFQGFFYYRFKVKQERLMKTHNFNMSRYNELCKACYPSYHHGGVNENSEPSPSFHHHPGEAHVRALHR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00250 351 Pfam Mitochondrial calcium uniporter 156 314 IPR006769 -
Cca05g00250 351 MobiDBLite consensus disorder prediction 26 46 - -
Cca05g00250 351 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 1 321 IPR039055 GO:0051560
Cca05g00250 351 MobiDBLite consensus disorder prediction 29 46 - -
Cca05g00250 351 PANTHER CALCIUM UNIPORTER PROTEIN 4, MITOCHONDRIAL 1 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00250 Cca-Chr5 5344735 5347882 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00250 05 5344735 5347882 Cca05g00250 05 5344735 5347882 ECH
Cca05g00250 05 5344735 5347882 Cca07g00382 07 4995776 4998120 PCT