Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00245 ATGGAGGTTTGCGGGTCAATCAAATCTGAAAGTAGTTTAAAGCACCGCCCTCTGACCCCTATTAGGTTGTTAAGGGGTCTGATATGTTTAGTGGTGTTTCTGTCTACAGCTTTTATGTGTTTAGTCTATTTTACGCCGGTGGCAGTTGTAGGATTGCGGCTTTTCAGCATACGTTGTAGCAGGAAGACAGTGTCATTCATCTTTGGACTTTGGCTATCTCTTTGGCCTTTTCTATTCGAAAAGATAAACAAAACTAAAGTTGTCTTTTCTGGAGACAGTATTCCAATGAAGGAACGTGTTTTACTAATTGCAAATCACAGAACTGAGGTTGATTGGATGTACTTGTGGGATCTTGCACTTAGAAAGGGAAGACTGGGATGCATAAAATACATCCTTAAGAGCAGTCTGATGAAACTACCTATTTTTGGTTGGGGATTTCACATTCTGGAGTTCATTGCAGTGGAGAGGAAGTGGGAGATAGATGAGCAAATATTGCACCAAAAGCTTTCAACCTTAAAGGATCCTCAAGATCCCTTATGGCTAGCTATTTTTCCTGAAGGAACCGATTATACTGATAAGAAGAGTAAAAATAGTCAAAAATTTGCTGCTGAAGCTGGACTCCCTGTACTCACAAATGTATTACTTCCAAAAACAAAGGGGTTTCATGCTTGCTTGAAAGCTCTACGAGACTCATTGGATGCAGTGTACGATGTGACAATTGCATACAAGAATCAGTGTCCTTCCTTTCTGGACAATGTTTTTGGTATTGACCCTTCAGAAGTGCACATGCATGTTCGGCGTATTCCTGTGGAGAAGATTCCGACCTCTGAAACCAACGCTGGTTCTTGGTTAATGAATACATTCCAGATCAAGGACCAACTGCTTTCAGATTTTAAGATTCAAGGCCATTTCCCTAACCAACTAAATGAGAATGAGATTTCTACATTTAAGAGCTTACTTACTGTTACCTTGGTAGTTTCGGTTACTGTCATGTTTATTTATTTTACATTTTTCTCTCTCTTTTGGTTTAAACTGTATGTAGGTCTATCTTGTGCATATCTTGCTGTTGCAACGTGCTTCAATTTTCAATTGATGCCTTTATCTAACTATGTTCATGCACTCCATAACAAGAAGACACAAAAGAGTGTATAG 1152 0.3915 MEVCGSIKSESSLKHRPLTPIRLLRGLICLVVFLSTAFMCLVYFTPVAVVGLRLFSIRCSRKTVSFIFGLWLSLWPFLFEKINKTKVVFSGDSIPMKERVLLIANHRTEVDWMYLWDLALRKGRLGCIKYILKSSLMKLPIFGWGFHILEFIAVERKWEIDEQILHQKLSTLKDPQDPLWLAIFPEGTDYTDKKSKNSQKFAAEAGLPVLTNVLLPKTKGFHACLKALRDSLDAVYDVTIAYKNQCPSFLDNVFGIDPSEVHMHVRRIPVEKIPTSETNAGSWLMNTFQIKDQLLSDFKIQGHFPNQLNENEISTFKSLLTVTLVVSVTVMFIYFTFFSLFWFKLYVGLSCAYLAVATCFNFQLMPLSNYVHALHNKKTQKSV 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00245 383 CDD LPLAT_LCLAT1-like 76 266 - -
Cca05g00245 383 PANTHER LYSOPHOSPHATIDYL ACYLTRANSFERASE 5-RELATED 1 378 - -
Cca05g00245 383 SMART plsc_2 100 214 IPR002123 GO:0016746
Cca05g00245 383 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 36 247 - -
Cca05g00245 383 Pfam Acyltransferase C-terminus 254 323 IPR032098 -
Cca05g00245 383 Pfam Acyltransferase 89 243 IPR002123 GO:0016746
Cca05g00245 383 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00245 Cca-Chr5 5242733 5246613 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00245 05 5242733 5246613 Cca05g00245 05 5242733 5246613 ECH