Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00235 ATGGCGGTTTCCCTATCAGCTCTCACAACCTCCCTCTCTTCGCTCTCTTTCTCTTCCAACGTTTCTCAGAGACCTAACAccctctccttcgccagaacccaatccttctccctctcccgcttcgccaaagccccctccctcctcgtctccGCCACCGCGCTCGCCGAACCGGAAACCGCCGACCTCAGGAAATACGTCAAGTCGCGGCTCCCCGGCGGGTTCGCCGCTCAAACGATCATCGGCACCGGTCGCCGTAAGAGCGCCATCGCTCGCGTTGTTCTTCAGGAAGGAACCGGCAAATTCATCATCAATTACCGCGACGCTAAGGAATATCTTCAAGGAAATCCATTGTGGCTTCAATACATTAAGGTCCCCTTAGTAACTTTGGGATATGAAAGTAATTATGATGTTTTTGTCAAAGCTGAGGGTGGTGGCCTGTCTGGTCAGGCTCAGGCAATCTCTCTTGGCATTGCTCGTGCCTTGCTGAAGGTGAGCGAAGATCATAGATCACCTTTAAGACAGGAAGGACTTCTTACCAGAGATTCCAGAGTGGTTGAAAGGAAGAAAGTTGGTCTGAAGAAAGCACGTAAAGCCCCTCAATATTCCAAACGTTGA 615 0.4439 MAVSLSALTTSLSSLSFSSNVSQRPNTLSFARTQSFSLSRFAKAPSLLVSATALAEPETADLRKYVKSRLPGGFAAQTIIGTGRRKSAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYESNYDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRSPLRQEGLLTRDSRVVERKKVGLKKARKAPQYSKR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00235 204 PANTHER 28S RIBOSOMAL PROTEIN S9, MITOCHONDRIAL 59 204 - -
Cca05g00235 204 Pfam Ribosomal protein S9/S16 83 204 IPR000754 GO:0003735|GO:0005840|GO:0006412
Cca05g00235 204 PANTHER RIBOSOMAL PROTEIN S9 59 204 IPR000754 GO:0003735|GO:0005840|GO:0006412
Cca05g00235 204 Hamap 30S ribosomal protein S9 [rpsI]. 74 204 IPR023035 -
Cca05g00235 204 ProSitePatterns Ribosomal protein S9 signature. 143 161 IPR020574 GO:0003735|GO:0005840|GO:0006412
Cca05g00235 204 Gene3D - 70 204 IPR014721 -
Cca05g00235 204 SUPERFAMILY Ribosomal protein S5 domain 2-like 78 204 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00235 Cca-Chr5 5047161 5050286 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00235 05 5047161 5050286 Cca05g00235 05 5047161 5050286 ECH