Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00234 ATGTTCCacaacaacaacatcaacaacagcaTATCGATCCCCGTCTCGGACGACGAATCCGACGAGCTGGGTCGGATGCGGATCCGCGCGCGGCGCAAGCGCAAGAAACTCGGCAACAGACGCTTGCTCAGGAAGCTACTCCTCCGATACTGGATGCTACTCATCATTATTCCCGCCACGGCTTTGCTCCTATTCGAGACCACCAGAATTGCCCGAAAGCCTAGCTTAGACACCAACGCCGACGCACAAACACACTCTATTCACGTTCGTAGATCTACTCCCGCATTGCGGAAGGAACCCCCCGCCAACTTGAATCGCCTCGATCCTACCACCCATGTTGTGGGTGGTGTCAGAGAGCGTTGCTTGAAGCTCCTACCACATGAAAAGCTTGAGCATCTGGATATTCCTGCGGAAGAAGAATCTTTTAGTTTTCCTGTTGGTGAAGTTTTATACATGTCAGAAAGTGATGAGTCTTTTGTAGGAGGGAATGTTACGCTGTCTCAATTGCGTACAGAGGACACAAGGTTTAATTTATTTACCGGTAATCAAACATTTGAACAGAGAGATAAAAGTTTTGAGGCAAAGGAAACTATGATGGTACATTGCGGATTCTACAGTGTGAATGGAGGGTTTAAGATATCTGATGAAGATAAAAGTTTTATGCAAAGTTGCAAAGTTGTGGTATCTACTTGTGCATTTGGTGGCGGGGATGATCTCTATCAACCAATCGGAATGTCTAAGGCTTCGCTTAAGAAGGTTTGCTATGTAGCATTCTGGGATGAAATCACGGTAAAAGCACAGGAGTTGGTGGAACGAAGAATTGGGGAAAATGGATTTATTGGAAAATGGCGTGTTGTTGTCGTTCAGGATCTTCCTTTTGCCGATCAAAGGTTGAATGGTAAAATTCCCAAGATGTTAAGCCATCGCCTTTTCCCTCAAGCAAAATACTCTATTTGGGTAGACTCCAAGTCCCAATTCCGGAGAGACCCACTAGGCGTGTTGGAAGCACTCCTTTGGCGCACAAATACTATACTAGCCTTATCAGAACATGGAGCTCGCAGTAGTGTCTATGATGAGGCTAAGGCTGTTGTCAAGAAGAACAAAGCCAAGCCAGAGGAAGTTGAAGTGCAACTGAATCAATACAGAAAAGATGGCTTGCCTGAAGACAAGAGATTTAATGGAAAAAAAGCTCTATGTGAAGCCTCTGTCATCGTGAGGAAGCATACACCACTAACTAATCTATTGATGTGCGTCTGGTTTAATGAGGTGGTTCGCTTCACTTCTAGGGATCAGCTCAGCTTCCCATACGTCCTGTGGCGGCTGAAGGCATTCAAAAACATTAATACATTCCCTGTTTGTACTCGCAAGGATCTTGTCAATATTTCTCTAGCCAATCTGAATCAGGTTGTTTTATAA 1416 0.4435 MFHNNNINNSISIPVSDDESDELGRMRIRARRKRKKLGNRRLLRKLLLRYWMLLIIIPATALLLFETTRIARKPSLDTNADAQTHSIHVRRSTPALRKEPPANLNRLDPTTHVVGGVRERCLKLLPHEKLEHLDIPAEEESFSFPVGEVLYMSESDESFVGGNVTLSQLRTEDTRFNLFTGNQTFEQRDKSFEAKETMMVHCGFYSVNGGFKISDEDKSFMQSCKVVVSTCAFGGGDDLYQPIGMSKASLKKVCYVAFWDEITVKAQELVERRIGENGFIGKWRVVVVQDLPFADQRLNGKIPKMLSHRLFPQAKYSIWVDSKSQFRRDPLGVLEALLWRTNTILALSEHGARSSVYDEAKAVVKKNKAKPEEVEVQLNQYRKDGLPEDKRFNGKKALCEASVIVRKHTPLTNLLMCVWFNEVVRFTSRDQLSFPYVLWRLKAFKNINTFPVCTRKDLVNISLANLNQVVL 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00234 471 MobiDBLite consensus disorder prediction 76 108 - -
Cca05g00234 471 PANTHER ALKALINE CERAMIDASE-RELATED 6 460 IPR006852 -
Cca05g00234 471 Pfam Protein of unknown function (DUF616) 170 460 IPR006852 -
Cca05g00234 471 PANTHER OS01G0749100 PROTEIN 6 460 - -
Cca05g00234 471 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00234 Cca-Chr5 5042359 5045450 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00234 05 5042359 5045450 Cca05g00234 05 5042359 5045450 ECH