Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00228 ATGGACGGAGCGAAGCGAAGGATTCCCGGAAAGAGAAAGAAGGAGTGCACAAATTTCACGAGTCGTACCTACTACCTAGTCGCTACTATTGTTTTTGAGGTCAATAAAAAAAACCGCGCTAGCTCTTCCATCATGTTCAATGGTCAGTGGTCAGTGGTCAGCacacatacacatacacatacacatacTGACATACATATTCCATTCTCTATAAATAATACATACCCCTGGCCCTGGCTTTGCATCAAACACAAACACCCACAGGCCACAGCAACAAACATGGCAACTTCCTCCGCCACGCTCTCCCCTCCATTCCTGCGTCACGATTTCCCCTCCGCCAGAAAACAAGAAACACCTCGCACCCTCCGCGTGCTTGCCTCCGTATCGGAGAAACCCGTAGCGGCGGTGTCGGTGACCGCCCCGGAGCCCACCAAGCTCCCCATCCGCAAAATCCCCGGCGACTGCGGGTTCCCGGTCATCGGCCCCTTGAAGGACCGCCAAGACTACTTCTACAAGCAAGGGAGAGATGAGTTCTTCAAGTCCCGCATCCAGAAGTACCAGTCAACGGTCTTCCGCACCAACATGCCACCTGGCCCCTTCCTGGCCCCCAACCCAAACGTCGTCGTTCTCCTCGACGGTAAATCCTTCCCTCTCCTCTTCGACACATCCAAGGTGGAGAAAAGAGACGTCTTCACCGGCACCTACATGCCCTCCACCGACCTCACCGGCGGCTACAGAGTCCTCTCCTACCTGGACCCCTCCGAACCCAAACACGCCCTCCTCAAGCAGCTCATGTTCTTCCTCCTCAAGTCCCGCCGCAGCCACGTCATCCCCGAGTTTCACGCTTCCTACAACGAACTCTTCCAGGCGCTGGAGTCCAACCTGGCGGAGAAAGGCAAAGCCAGCTTCAGCGAAGCCAACGACCAAGCCGCCTTCGACTTCCTCGGCCGCTCCCTCTTCGGGTCCAACCCCGCCGACAGCGCACTCGCCCGCGACGGCCCAAAGCTCGTCCAGAAATGGGTCCTCTTCCAGCTGGGCCCAATTCTCAAACTGGGGTTCCCGCAGTTTCTAGAAGAATCCACCATCCGCACCTTCCGCCTCCCCTCCTTCCTCATCAAAAAAGACTACCAGAGACTCTACGACTTCTTCTACCAATCCTCCGCCTTCGTCTTCGAGGAGGCCGACCGCTTGGGAATCGCGCGCGACGAGGCTTGTCACAATCTCTTATTCGCCACCTGCTTTAATTCATTCGGCGGGATGAAGCTCTTTTTCCCCAACGTCCTCAAGTGGATCGGCCGCGCCGGGGTCAAGCTCCACGCGCGCCTCGCAACCGAGATTAGAACCGCCGTCAGATCCGCCGCCGGGGAGATCACCATGGCCGCCATGGAGAACATGCCGCTCATGAAATCCGTGGTGTACGAGGCCTTCCGCATCGACCCTCCGGTGCCGCTGCAGTTTGGGAAAGCCAAGCGGGATTTGATTGTGGAGAGCCACGAGCACGCGTTTCACGTGAAGGAGGGGGAGATGCTCTTTGGCTACCAACCTTTTGCCACCAAGGATCCTAAGATTTTCGATCGGGCCGAGGAGTTTTTCGGGGACAGGTTTATGGGGGAGGAAGGGGAGAAGCTACTCAACCACGTGCTTTGGTCCAATGGCCCTGAAACTGAATCTCCAACACTCGGGAACAAGCAATGTGCAGGGAAGGATTTCGTCACGTTGGTGTCTCGCCTTCTCGTGGTCGAGTTTTTCCTTCGCTATGACTCCTTTGAGATTCAAGTGGCAACTTCGCCGTTGGGATCTTCCGTTACCATTACCTCTCTTAAGAGAGCAAGCTTTTAG 1839 0.5546 MDGAKRRIPGKRKKECTNFTSRTYYLVATIVFEVNKKNRASSSIMFNGQWSVVSTHTHTHTHTDIHIPFSINNTYPWPWLCIKHKHPQATATNMATSSATLSPPFLRHDFPSARKQETPRTLRVLASVSEKPVAAVSVTAPEPTKLPIRKIPGDCGFPVIGPLKDRQDYFYKQGRDEFFKSRIQKYQSTVFRTNMPPGPFLAPNPNVVVLLDGKSFPLLFDTSKVEKRDVFTGTYMPSTDLTGGYRVLSYLDPSEPKHALLKQLMFFLLKSRRSHVIPEFHASYNELFQALESNLAEKGKASFSEANDQAAFDFLGRSLFGSNPADSALARDGPKLVQKWVLFQLGPILKLGFPQFLEESTIRTFRLPSFLIKKDYQRLYDFFYQSSAFVFEEADRLGIARDEACHNLLFATCFNSFGGMKLFFPNVLKWIGRAGVKLHARLATEIRTAVRSAAGEITMAAMENMPLMKSVVYEAFRIDPPVPLQFGKAKRDLIVESHEHAFHVKEGEMLFGYQPFATKDPKIFDRAEEFFGDRFMGEEGEKLLNHVLWSNGPETESPTLGNKQCAGKDFVTLVSRLLVVEFFLRYDSFEIQVATSPLGSSVTITSLKRASF 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00228 612 Pfam Cytochrome P450 439 586 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00228 612 Gene3D Cytochrome P450 146 612 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00228 612 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 127 610 - -
Cca05g00228 612 PANTHER CYTOCHROME P450 26 127 610 - -
Cca05g00228 612 SUPERFAMILY Cytochrome P450 146 592 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00228 612 PRINTS E-class P450 group IV signature 565 583 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00228 612 PRINTS E-class P450 group IV signature 465 481 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00228 612 PRINTS E-class P450 group IV signature 518 536 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00228 Cca-Chr5 4862925 4865744 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00228 05 4862925 4865744 Cca05g00228 05 4862925 4865744 ECH