Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00217 ATGGGCGAAGAGCACCACCATGCAccgccgccggttcaggcgcctccgccgggtccgccgccgccgAATCTAGCACTCTCCAGAGGGCCTGTCTGGAATCCAGCTGAGCAACTCTCGCAACTTCAGTATTGCATCCACTCCAACCCTTCGTGGCCGGAAGCGCTTCTACTGGGTTTTCAGCACTACATTGTGATGCTTGGAACAACGGTTCTGATTGCAACCACGCTCGTGCCTCTAATGGGTGGGAACCATGGTGACAAGGCTCGCGTGATTCAATCTTTGTTGTTTATGTCTGGGGTGAACACACTGCTTCAGACTTGGTTTGGGTCTAGGCTTCCGACGGTGATGGGTGGATCCGTTGCTTTTTTTCTTCCAGTATTGTCCATTATAAATGATTACACTGACAGGACATTTCCTTCTGAACATGAGAGGTTTACCTACACAATCAGAACAATTCAAGGATCCCTAATTGTATCTTCTTTCGTCAATATCTTCCTTGGGTTTAGTAAGACTTGGGGAAATTTGACAAGGTTGTTTAGTCCCATAACCATTGTACCTGTGGTATGTGTGGTGGGTCTTGGTCTGTTCTCCAGGGGCTTTCCATTGCTTGCAAATTGTGTGCAGATTGGATTACCTATGCTCATTCTACTGGTCATAACTCAGCAGTATATGAAGCGTATTCATTCTGCTGCTCATCAAGTACTCGAGAGGTTTGCTTTACTTTTCTGCATTGCTGTTGTCTGGGCGTTTGCTGCTATCCTAACTGTGGCTGGTGCATACAATAATGCTAAAACAAACACCCAAGTGAGTTGTCGCACGGATCGCTCATACCTTATGTCTTCCGCTCCTTGGATTAAAATTCCATATCCATTCCAGTGGGGTACCCCAATATTCAAAGCTAGTCATGTCTTTGGGATGATGGGGGCAGCACTTGTCTCTTCTGCTGAGTCAACTGGTGCTTTCTTTGCTGCAGCCAGACTTTCTGGTGCAACACCACCGCCTGCACATGTTCTCAGTCGAAGCATTGGGCTGCAGGGCATTGGCATGCTGCTTGAAGGCATATTTGGTTCTGTTGTTGGCACTTCTGTATCTGTTGAAAATGTTGGTCTACTTGGTCTAACGCATATAGGGAGCCGCAGAGTGGTGCAAATATCATGTGGTTTTATGATCTTCTTCTCTATATTTGGGAAATTCGGAGCCTTTTTCGCATCGATTCCCCTACCAATATTTGCTGCTATATACTGTGTTCTATTTGGTATTGTGGCTGCTGTTGGGATTTCTTTTATACAGTTTGCAAATACCAATTCCATAAGAAATATCTATGTTCTGGGTCTAACCTTGTTTCTTGGGATATCAATACCACAATATTTTGTCATGAACACAGCACCTGATGGTCATGGTCCAGTTAGAACAGATGGTGGATGGTTCAATGACATTTTGAACACCATATTCTCATCTCCCGCAACTGTGGCTATAATCGTTGGGACAATAATTGACAACACACTTGAAGGCAAACAAACAGCTGTGGACAGAGGACTTCCATGGTGGGGTCCATTCCAGAATAGGAAGGGAGATGTTAGAAATGAGGAGTTCTATCGTCTACCTCTCAGGATAAATGAGTATATGCCAACTAGATTTCTCTAA 1644 0.4325 MGEEHHHAPPPVQAPPPGPPPPNLALSRGPVWNPAEQLSQLQYCIHSNPSWPEALLLGFQHYIVMLGTTVLIATTLVPLMGGNHGDKARVIQSLLFMSGVNTLLQTWFGSRLPTVMGGSVAFFLPVLSIINDYTDRTFPSEHERFTYTIRTIQGSLIVSSFVNIFLGFSKTWGNLTRLFSPITIVPVVCVVGLGLFSRGFPLLANCVQIGLPMLILLVITQQYMKRIHSAAHQVLERFALLFCIAVVWAFAAILTVAGAYNNAKTNTQVSCRTDRSYLMSSAPWIKIPYPFQWGTPIFKASHVFGMMGAALVSSAESTGAFFAAARLSGATPPPAHVLSRSIGLQGIGMLLEGIFGSVVGTSVSVENVGLLGLTHIGSRRVVQISCGFMIFFSIFGKFGAFFASIPLPIFAAIYCVLFGIVAAVGISFIQFANTNSIRNIYVLGLTLFLGISIPQYFVMNTAPDGHGPVRTDGGWFNDILNTIFSSPATVAIIVGTIIDNTLEGKQTAVDRGLPWWGPFQNRKGDVRNEEFYRLPLRINEYMPTRFL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00217 547 Pfam Permease family 54 457 IPR006043 GO:0016020|GO:0022857|GO:0055085
Cca05g00217 547 MobiDBLite consensus disorder prediction 9 27 - -
Cca05g00217 547 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 4 545 - -
Cca05g00217 547 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 3 4 545 IPR029943 -
Cca05g00217 547 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00217 Cca-Chr5 4615129 4622817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00217 34 543 Organic Solute Cotransporters AT2G34190 60.392 0.0 644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00217 05 4615129 4622817 Cca05g00217 05 4615129 4622817 ECH