Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00213 ATGAAACAGAAAGCGTTCTTCTTCACCAGACTGTTTCCGACTCCGTCGCTGTTTACTCTTTCTCCGCATCCATGTTTCCCCTTCTCCACTCACACTCGCCACTCCTTCGACGACGTCGTTCCGGGCTGCAGCGCCGTTTACCGCCACGCGCTCAAGTTCCAGCGCCCAGCCACTATTTGGTGGACCCCACGCCTCGAGAACACCGCTAGCTTCATCGGCTCCGTCACGCGCGAACCGGTGCGCGTCAACACAAGAAACGGTAGATTCGGAGTTTATACTTTGCTCAATGTTCGGAGATCAAACCAATCAAATAGCTCGTATTTCAGGGTGTTTCTGATGATGTGGAACAGTGTGGCAGAGCTTGCTTCAGAACACTTGCAAGCAAATGATTTTATTTATGTTTCAGGTTGTTTGGAATCTTACACTAAACCTGATGCCAATGGAAATCTCCGATTGAATTATAAGCTAAATGTGAAGAAGTTCGAGTTTGTTGCTCAAAGTAATCAAGGCCACAAGAAACTGGAATCTGTTGAAGTGGAAGCTGGCGTGCGAAGTAATCAAAAGCGGCTTTACCTTTGGCAAGTGTTTTTTGCCAACCCAAATGAGTGGTGGGATCAAAGAAAGCGCAAGTTAAATCCAAAGCAGCCTGATTTTAAGCACAAGGATACTGGTGAAGTTCTGTGGCTGAGTAACTATGATCCTCCATGGGTTCAAAGACAACTCCAATTGCTTGACTCAAAACATGCAATAGGAGGATCTATTGGTCATCGTTCTCGTGTCAGCAACTGGGTTTATGACGAGTAG 804 0.4664 MKQKAFFFTRLFPTPSLFTLSPHPCFPFSTHTRHSFDDVVPGCSAVYRHALKFQRPATIWWTPRLENTASFIGSVTREPVRVNTRNGRFGVYTLLNVRRSNQSNSSYFRVFLMMWNSVAELASEHLQANDFIYVSGCLESYTKPDANGNLRLNYKLNVKKFEFVAQSNQGHKKLESVEVEAGVRSNQKRLYLWQVFFANPNEWWDQRKRKLNPKQPDFKHKDTGEVLWLSNYDPPWVQRQLQLLDSKHAIGGSIGHRSRVSNWVYDE 267
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00213 267 Gene3D - 63 166 IPR012340 -
Cca05g00213 267 PANTHER PROTEIN OSB1, MITOCHONDRIAL 29 264 - -
Cca05g00213 267 Pfam Single-strand binding protein family 67 163 IPR000424 GO:0003697
Cca05g00213 267 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN 29 264 IPR011344 GO:0003697|GO:0006260
Cca05g00213 267 ProSiteProfiles Single-strand binding (SSB) domain profile. 65 165 IPR000424 GO:0003697
Cca05g00213 267 SUPERFAMILY Nucleic acid-binding proteins 66 169 IPR012340 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca05g00213 Cca-Chr5 4569571 4573951 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00213 05 4569571 4573951 Cca05g00213 05 4569571 4573951 ECH