Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00204 ATGTGGTTAACAGCGAAGCCCGTGCGACATCTATGTTTCCCAATCCCATTCTCAATCCCAAACAAGTGCAATTGCATTTGCAGCTTATCCATAACAGCAGCAACCAACCCCAACGCCAACACGGGAATTGATACTAGTCTCACTCAATCTCACACTcccaagcccaagcccaagcccaagcccaagcccaagcccaagcccaaTCCTACCGTGAAGAAGAGGAAGAGGTATCGAAAGCTGTACCCCGGAGAGACCACCGGCATCGCCGAAGAGATGAGGTTCGTCGCCATGAGACTCCGAAACGGCGACGTTTCACAAGACCAGCCACATTCCAACACCTGGCAGGCCTCCCTGGAAGGCTTCCTCTCTTACCTCGTTGACAGCCACCTCATTTTCGCTACTCTCCAACGCATCGTCGACGAATCCGAAAACGTTTCTTATGCATACATGAGGAAAACTGGGTTGGAAAGATCAGAAGGGCTTTTGAAGGATGTCAAATGGTTGGAGCAAGAAGGATATGAGATTCCGAATCCCAGTTCTTCAGGGCTAACATATGCCAAATATTTGGAGGAACTTGCAGAGATAAGCGCACCCATGTTTCTCTCCCATTTTTACAATATCTACTTTTCTCATATAGTTGCTGGTCAGTTCATTGCAAAGAAGGTTTCTGAAAATCTCTTGGAGGGTAAGGAGCTGGAGTTTTACAGATGGGAAGGAGATGTACCTGAATTGTTGAAAGGTGTTCGTGATAAGCTGAACATGCTTTCAGAGCATTGGTCTCGAGATGAAAAGAATAGATGTTTAAAAGAAACTACAAAGGCATTCCGGTTTATGGGACAGATTGTTCGTCTAATTGTTTCGTAA 864 0.4294 MWLTAKPVRHLCFPIPFSIPNKCNCICSLSITAATNPNANTGIDTSLTQSHTPKPKPKPKPKPKPKPNPTVKKRKRYRKLYPGETTGIAEEMRFVAMRLRNGDVSQDQPHSNTWQASLEGFLSYLVDSHLIFATLQRIVDESENVSYAYMRKTGLERSEGLLKDVKWLEQEGYEIPNPSSSGLTYAKYLEELAEISAPMFLSHFYNIYFSHIVAGQFIAKKVSENLLEGKELEFYRWEGDVPELLKGVRDKLNMLSEHWSRDEKNRCLKETTKAFRFMGQIVRLIVS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00204 287 CDD HemeO 87 285 IPR002051 GO:0004392|GO:0006788
Cca05g00204 287 PANTHER HEME OXYGENASE 1, CHLOROPLASTIC-RELATED 59 286 IPR016951 -
Cca05g00204 287 SUPERFAMILY Heme oxygenase-like 113 285 IPR016084 -
Cca05g00204 287 MobiDBLite consensus disorder prediction 55 74 - -
Cca05g00204 287 Gene3D - 89 287 IPR016084 -
Cca05g00204 287 MobiDBLite consensus disorder prediction 40 74 - -
Cca05g00204 287 Pfam Heme oxygenase 130 283 IPR016053 GO:0004392|GO:0006788
Cca05g00204 287 PANTHER INACTIVE HEME OXYGENASE 2, CHLOROPLASTIC-RELATED 59 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00204 Cca-Chr5 4388428 4393309 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00204 05 4388428 4393309 Cca05g00204 05 4388428 4393309 ECH