Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00203 ATGCATCGAATCGGTTTCAGAACGCGACCCCTTCTTCGCTTCTCTCGCCCTCGCACCATTTTCTCTTCAACAAAACCTATCATCAATTCAGCAAATAAAAACCTACAAAATCCCCAAACTGCCCCTCCACCACTTCCCGATCACCGCCACGCGCTCTCTCCTATCGCTTCGCAATCCCATTCTCGCGCCTCCCTCCTCGCTCTCTCCGCCGCCGCAATCTCCGCCCTCCTCGCCTCCGCCGCGCTCCTCTCCGACTCCGACCACCGCGGAGCCGCCAATCCCCTCTACGAGGGCGCGGAGCGCGTCGCGCGCAAGGCCGCGGACTCCTTCGACCGGCTCTTCCACCACGCCAAGCGCACCGGCGTCGCCGCCGCTGTCCTATGGCAGTCGCTGCGCTCGGTGCTGTCTTCGGCGAACCACGAGGTCCGCTCCGGCTTCGAGATTCGCGTCGCGGCCTTGCTCGCCGACATCGCCGCCGCGAACTCAGGCCGCAGGGCCGCCATCgacggcggcggcactcaggcggagtcggcgagggcgctggcgTATCTGATTGCGGACCCTAACGTGTCCGCGGCGGTGCTTGGTCGGCCTCACGCGGTGCCGAATCTTCTGAGGTTCATCTTCTCGTGCCAGCCTCGGCGTTCAAAGAATAAGAAGCAGCACTCAAGACGTAGTGCATTTGATATTTCTGATTCTTTGAAAGGCAGGAGCATGCTTGTGGCTTCCATCATGGATATCGTTACGTCCAGCTGTGACAATGCAGAAGAGGTATCTTTTAAGCCATCATTGCCTGGAAATGCTGAAACCAGAGACATTGCTGCAGCCCTACAAGTTATCGAGGAAGGGGGTTTGCATTTGGATGAGCCACCCGATGGTGGAGATGATGATGGTGGAACAAGAGGGAGAGGTATTGGAATCAAGATACTTGAAGGTACCCCAGTTTTAGGGCTTTCAAGGACCAACAGTGATGCTTGTCATGAAGAACTGAAGCATCAAACTCCTAAAACTCTCATATATCAAAATAAGTATGACAATTCGCTGGAACAAAAGAGTATGTCTTCTGCTGTTGTTCCTGGCCTATGGGACGATTTACACTGTGAACATGTTGCTGTTCCTTTTGCCACCTGGGCATTGGCAAATTGGGCAACGGCATCACAGTTGAATAGATCTCATATTCAAGAACTGGATCGAGATGGAAATGCTGTCATGTCTGCTTTAATGGCACCTGAGAGATCTGTAAAATGGCATGCAAGTTTGGTGGTGTGGTTGCTATTAGAAGATCGGAATACACCTTTGAATGAATCCGTTTCTGATTGGGCTTCCAGTCTTCTTTCTACTATATCTCAGGCATGCAAGCATGAAGATGTTTCTTTGGCTCAGGTAGCTTTCTCTGCCTTTCTCTTATCTGTTGAGAGGAGCCCTGGAGTGCAGAAGATAGTGATGGAGGAGGGTCTTAATCCAATGAGAGACATTGCCaagcagatgacaaagcataagcaagtgcaagaagcaatggcaaaggcaTTAGAGCTACTTTGTACTGGTGAGCTGCATTTGTCTCTTGAAGAGAGTCAAAAATGGTCAGGAATTCTTCTTCCTTGGGTTTTTGGAACATTTTCCTCTGATACTATACGATCTTCAGCCATAAAGATTCTTTCTCAGATCTTGGAAGACTATGGACCAACATCTGTACCACTTTCTCAAGGATGGTTAGCCATGATGCTATCTGAAGTACATAGTTCCATCAAGAAATCAAATGATAAAAGAACCAGTCAACCTAAGAGTGATAATGTAAAGACGTTAATCAATAATGCAAATATTGCTAATGCTGCACAAGTTGCGAATCAACTATCTAGTGCTGTTGTTAATCTGGCAGCTAAACAATTGGGAATTACATCTAGTACTGGGGATACAAACCCACTGGCTGATTTTCTGTCTCTGGGACCTTTAGCAGGACCATTTAAAAATTTAAAAAAAGATAATCTGCCTAAATTAGATGCTGCAGATTCTGCCGTGGCAACCCTAAAAGGAATTAAAGCTCTGACTGAAGTTTGTGCCGAAGACTCTCTGTGTCAGGACATGATAGTTGATTTTGGGATTTTATGTTTGCTGAGGCGCTTCTTGTTGAGTGATGATTATGAGAAATTGGCTGCTATTGAGGCTTATGATGCATCATCTAGAGCACATGAGAGGAAGGAGCAGATATCAAATGAAGACAGGGAACCAGCTATATCAGATGTAAATGATCCAGCTAGTGTCCGTGTTCCACCTACCGCTCATATCCGCAAGCATGCAGCTCGGTTGTTGACCATCCTCTCACTGCTTCCCAAAGTCAAGAAGGTCATCACAGCTGATGAAACTTGGTGCAAATGGCTTGATGATTGTGCTAATGGGAGGATTCCAGGTTGCAGTGACCTTAAAATGCAAAGCTATGCCAGGGCAGCACTTTTAAATATGTCTTGCAATGACCAGCCTAATGGAAAGTCTGAAAGTGGAAGTGGAGGCCTTTCTGATGGTGGTGTAAAAAATTATAGGAACTTATGTCCTCGGTATGATGACATGATATTCTTGATAAATTCTCATCTTCCTCACTGGAAATATCCCAAAGAAACAGATAAACAAGAAGCTTTCTCAGAGGAGATATCTCTGGTTACTTATGCTGATACCGAGGATGGAACAGAATCCTGGAATGACAGCAACTGCTCTATTTCTTATGATTCAACTAAAAGCAACCCAGATGAAAATTGTCCTCTACTAGACATAGTTTTTGTCCACGGACTCCGTGGTGGGCCTTACAAAACTTGGCGGATAGCTGAGGAAAAATCCTCAACTTCATCACCTTTGGTGGAGAAGATTGATGAGGAAGCTGGAAAGCTTGGAACCTTTTGGCCTGGTGAATGGCTTTCCAGTGATTTTCCCGAGGCTCGGATGTTTACCCTAAAATACAAGACTAATCTCACACAGTGGTCTGGAGCTAGCTTGCCTCTTCAGGTTATAATATTTTCCACACTGCATTATTTATTGTCTAGAAACAGAATTGGGAATCGACCTGTTGTTTTTGTTACTCACAGTATGGGAGGCCTGGTTGTGAAGCAGATTCTTCATAAAGCAAAGGATGAAAGATTTGATAATCTTGTGAAAAATACAATAGGAATTGTTTTTTATAGCTGCCCACATTTTGGTAGCAAACTTGCAGATATGCCTTGGCGAATGGGTTTTGTACTCCGTCCTGCTCCAACAATAGGAGAGCTAAGAAGTGGATCTTCAAGACTAATAGAGCTGAATGACTATATTCGTCACCTTCATAAGAAAGGGTTACTTGACGTCCTCAGCTTTTGTGAGACCAAGGTAACTCCAATAGTTGAAGGTTATGGTGGATGGGCCTTCCGTACAGAAATAGTACCAATTGAGTCAGCTTATCCTGGATTTGGGGAATTAGTTGTATTGGAGTCAACAGATCATATAAATTCGTGCAAACCAGTGAGCCGTTTAGACCCTTCTTATACGGAGACATTAAAGTTCTTGCAGAAATTAAAAGCATGCAATGGCTGA 3555 0.4444 MHRIGFRTRPLLRFSRPRTIFSSTKPIINSANKNLQNPQTAPPPLPDHRHALSPIASQSHSRASLLALSAAAISALLASAALLSDSDHRGAANPLYEGAERVARKAADSFDRLFHHAKRTGVAAAVLWQSLRSVLSSANHEVRSGFEIRVAALLADIAAANSGRRAAIDGGGTQAESARALAYLIADPNVSAAVLGRPHAVPNLLRFIFSCQPRRSKNKKQHSRRSAFDISDSLKGRSMLVASIMDIVTSSCDNAEEVSFKPSLPGNAETRDIAAALQVIEEGGLHLDEPPDGGDDDGGTRGRGIGIKILEGTPVLGLSRTNSDACHEELKHQTPKTLIYQNKYDNSLEQKSMSSAVVPGLWDDLHCEHVAVPFATWALANWATASQLNRSHIQELDRDGNAVMSALMAPERSVKWHASLVVWLLLEDRNTPLNESVSDWASSLLSTISQACKHEDVSLAQVAFSAFLLSVERSPGVQKIVMEEGLNPMRDIAKQMTKHKQVQEAMAKALELLCTGELHLSLEESQKWSGILLPWVFGTFSSDTIRSSAIKILSQILEDYGPTSVPLSQGWLAMMLSEVHSSIKKSNDKRTSQPKSDNVKTLINNANIANAAQVANQLSSAVVNLAAKQLGITSSTGDTNPLADFLSLGPLAGPFKNLKKDNLPKLDAADSAVATLKGIKALTEVCAEDSLCQDMIVDFGILCLLRRFLLSDDYEKLAAIEAYDASSRAHERKEQISNEDREPAISDVNDPASVRVPPTAHIRKHAARLLTILSLLPKVKKVITADETWCKWLDDCANGRIPGCSDLKMQSYARAALLNMSCNDQPNGKSESGSGGLSDGGVKNYRNLCPRYDDMIFLINSHLPHWKYPKETDKQEAFSEEISLVTYADTEDGTESWNDSNCSISYDSTKSNPDENCPLLDIVFVHGLRGGPYKTWRIAEEKSSTSSPLVEKIDEEAGKLGTFWPGEWLSSDFPEARMFTLKYKTNLTQWSGASLPLQVIIFSTLHYLLSRNRIGNRPVVFVTHSMGGLVVKQILHKAKDERFDNLVKNTIGIVFYSCPHFGSKLADMPWRMGFVLRPAPTIGELRSGSSRLIELNDYIRHLHKKGLLDVLSFCETKVTPIVEGYGGWAFRTEIVPIESAYPGFGELVVLESTDHINSCKPVSRLDPSYTETLKFLQKLKACNG 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00203 1184 MobiDBLite consensus disorder prediction 285 302 - -
Cca05g00203 1184 MobiDBLite consensus disorder prediction 284 304 - -
Cca05g00203 1184 Gene3D alpha/beta hydrolase 921 1110 IPR029058 -
Cca05g00203 1184 SUPERFAMILY ARM repeat 127 588 IPR016024 -
Cca05g00203 1184 MobiDBLite consensus disorder prediction 730 752 - -
Cca05g00203 1184 SUPERFAMILY alpha/beta-Hydrolases 921 1178 IPR029058 -
Cca05g00203 1184 MobiDBLite consensus disorder prediction 730 746 - -
Cca05g00203 1184 MobiDBLite consensus disorder prediction 25 52 - -
Cca05g00203 1184 PANTHER - 1 1182 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00203 05 4377208 4387010 Cca05g00203 05 4377208 4387010 ECH