Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00175 ATGGCCGATTCTTCCAACCTCAAATCCGACGCCTTGTTGGAGCAGATGAAGCACCACCTCGCTTCCGACGCAGGCAAAGAAATCACCAAAAAAATTGGACTCGTTTATCAGATTCACATCGCTCCTCAGAAACTTGGATTCGACGAGGTCGTCTACACCGTTGATCTCAAGAAGGGAGAGGTCACCAAAGGGCCATATGAAGGAGGAAAGCCTGATGCATCTTTTTCGTTTAAGGATGAGGACTTTGTTAAGGTTGCCTTGGGGAAGATGAATCCGCAGATTGCCTTCATGAGGTTCAACCTTTCAATGGATTTTTTCCTTCCAAAATCAATGTTTTTGGTTGCTTTAACTTCCCttgtttgtttatttatttatttttaa 381 0.4226 MADSSNLKSDALLEQMKHHLASDAGKEITKKIGLVYQIHIAPQKLGFDEVVYTVDLKKGEVTKGPYEGGKPDASFSFKDEDFVKVALGKMNPQIAFMRFNLSMDFFLPKSMFLVALTSLVCLFIYF 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00175 126 Gene3D - 2 104 IPR036527 -
Cca05g00175 126 Pfam SCP-2 sterol transfer family 13 102 IPR003033 -
Cca05g00175 126 PANTHER SCP2 STEROL-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 4 102 - -
Cca05g00175 126 PANTHER STEROL CARRIER PROTEIN 2 SCP-2 FAMILY PROTEIN 4 102 IPR039543 -
Cca05g00175 126 SUPERFAMILY SCP-like 5 98 IPR036527 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00175 05 3974070 3977960 Cca05g00175 05 3974070 3977960 ECH