Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00170 ATGAAGAGCAATCTCAGAGTTCTAAAACAAGAAACTCCAACCACCTTCCACAACTCCGACAAGGGCATTAGGGAGACGGAATCCACAATGGGTGCAGAGTGGACAGACGAGAAACACAGCATGTATATAAAGTCTATAGAAGCATCTTTTGTTAATCAGTTATATGATTCTAAGCAAATGTGCAAAGGAACTTCAATTGACCCTGCTACCACTTCTGGCCAGTTCAAAGTGCTTCGTGGTGGGTGTTGGCAAAAAATCAATTTTCAAAGAGATAATCCACAAATGAGTAGGATTAGCCAGTGTCATGACTTGACAGAAAACCCATGGATTCAGCACTATCGAACTTCAAGCAAACAGAGAGGCATAGTAGCTCCATCCCTTCAAGAAAGTGTTACTACATCAAGCAAAGTTGTTGATTTAGGCCAAAGGAAAGGAGTTTCCACTGCATCAGGACATCTTCATATGTGTGAATCTCGTGTCTGCCATAAGGATATGCTTTGCAGTGATACAGAGATGTCAGACCAGAACTTTGTCGATGAAGAAGTGAAAGGCAAAAAGCAAAGTAAAAAAAGCAAGGTGAAACGACAGAGATCATTGATAACTGATGCATCAGAAGGCAATGATCAGGGAACAAAATAA 639 0.4085 MKSNLRVLKQETPTTFHNSDKGIRETESTMGAEWTDEKHSMYIKSIEASFVNQLYDSKQMCKGTSIDPATTSGQFKVLRGGCWQKINFQRDNPQMSRISQCHDLTENPWIQHYRTSSKQRGIVAPSLQESVTTSSKVVDLGQRKGVSTASGHLHMCESRVCHKDMLCSDTEMSDQNFVDEEVKGKKQSKKSKVKRQRSLITDASEGNDQGTK 212
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00170 212 MobiDBLite consensus disorder prediction 176 212 - -
Cca05g00170 212 PANTHER COLD REGULATED PROTEIN 27 10 209 IPR044678 GO:0009409|GO:0042752
Cca05g00170 212 PANTHER COLD REGULATED PROTEIN 27 10 209 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca05g00170 Cca-Chr5 3861406 3866318 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00170 05 3861406 3866318 Cca05g00170 05 3861406 3866318 ECH