Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00166 ATGGTCGTGGCTGATTCCGACTACGAAGGTCCCGCAATCGAAGCCCTCGGTTCTCTCTTTAAAGTCACCCAAGTCTTCCTCCGAGACGATGGCGTCCAGGTTCCATTCTTTGCTCAACGCGCGAAATCGGATGAAAATGACGCCTCTAGCCCCGTTCGCGCTGATTCGAGTGGCTTTATTACAGCCGAGGATTTAGAAATTACTAAACAACTGAATGAATTGGGGCTCCCTCTTTCTTTCCAGACAAACAAGAAGAAATTTGGATCGGTAAAAGGAAAAAAAAAGGGTAAACGATCGAAGCATCCACATACTTGTCACAACCCTGTAGATGAAACTCAACATAAAGTGAGTGGGGAGGAGGAGGCATCTCCTTCTAAATTTCATGATAAAACAAGTAGTTCTTTATCTTGTATGTCAATGCTGGGCCAAAGTGAATCATCTTACTGTGATGATGCAATAGATCATGATATGACCCAATGTCCCTCTGGTGAAGGAGATAATTCAGCTTGCTGTACTGGATTTGCTAGTGGTGTTTCCAGGGTGATAAATGATAATATAAATCATGCTACAACAAATGATGCCCAGGATGGTGACTTTTTAATCAGCAATTATTGTGTTGATTTGAAAGCTGCACCTACTTCAGATACTGGAGTCTCTGCTGGAAGCTATTTGACAGGTGCTGGTGTCAATTACTGTGGGGCAGAATATGTTGAAAGCTTGACAGACAGTGAATGTTTAGAAGTTTCACCAATTGTTGGCAAAAATATAGATGGTGAGCCTTTTTAtgatgctgctgctgctgctgcCACTTGTCATTCACATGCTATTGAATCAGAATTTCTTTGTGCGAGTTCAGAAGGGATTGGATGTGACAGGAATGATGTGTCAAATAATTATGGTGAACTTGGTGATTGGATGGCCCTCTGGGATACTTTCTATAAGAGAACATACTTCTATAATATTAAAACACACACTTCTACATGGGACACACCCTTGGGGATGGAGCATCTGGTAATTGCTGGGTGTACTGAATCAGATGATAGTGAAACTCTAAAGGCAGCAGAGGAGTGTGGAACACAAAATAACACTAAACCACCTGAGGAAACATTGATTGAAGAGAACTTGGAAGGAAAGCAACATGAAGAGTATTTGTCTGAGATTGGAGTTGCTGTTGGCAATTTGGTCTCTGACGTCACTACACATGGTGAAGACCAATCTCTTGATCATTCGAATGAGTGTCTTGAGAGAAGTAGTTGCAATGATGGAGTCTCATGCTGCTCAGTATCAAATACTCAGGATAATATCATTAGCTCTAATGAAAGTTGCATTCAAGCAGCACCAGAGGTTAATCATACACCCTTGGAAAACATGGAAATTGATACTTCTGAACTGGATACTAAATCTGATCCTTTCGAGTCAACAAAAAGTAAGAAAGTAAAAAGAAGACAAAGGCAGAGGAAACTATATAATGAAGCTGAAGATATGCACTTTCAAGAAGTGCCTGAAGTGTATTCTGCTACAATTGGAAAATATTGGTGTCAGAGGTATACTTTGTTCTCTAGATATGATGATGGTGTAAAAATGGACGAGGAAGGATGGTTTTCTGTCACTCCAGAGGCTATTGCTCAATATCAAGCAATACGATGTGCTACTGGTGTGATAATCGACGGTTTCACTGGTGTTGGTGGGAATGCTATCCAATTTGCACAAAAGTGCAGGCATGTAATTGGAATTGATATTGATCCATTGAAGATTGAATATGCTAGGCATAATGCTGGTATTTATGAGGTGGATGATCAAATTGACTTCATAGTGGGTGATTTCTTCCTCTTGGCACCAAAGTTAAAGGCTGATACTGTTTTCTTATCTCCACCATGGGGGGGACCTGATTATACCAAGGCTACTATTTATGACATGAAGACAATGCTTAGACCCCATGATGGATATACTTTGTTTAAAGTTGCAAAGGAGATTGCTTCCAGAATTGTTATGTTCCTTCCAAAAAATATCAATTTCAACCAATTGGCAGAGTTATCTTTGTTGTCCTGTCCACCATGGTCGCTAGAGGTGGAGAAGGTTTATTTAAATGGAAAGTTGAAGGCGATCACTGCTTATTTCAGTGATACAGCAGTTGTAGGGTGCTAA 2145 0.4 MVVADSDYEGPAIEALGSLFKVTQVFLRDDGVQVPFFAQRAKSDENDASSPVRADSSGFITAEDLEITKQLNELGLPLSFQTNKKKFGSVKGKKKGKRSKHPHTCHNPVDETQHKVSGEEEASPSKFHDKTSSSLSCMSMLGQSESSYCDDAIDHDMTQCPSGEGDNSACCTGFASGVSRVINDNINHATTNDAQDGDFLISNYCVDLKAAPTSDTGVSAGSYLTGAGVNYCGAEYVESLTDSECLEVSPIVGKNIDGEPFYDAAAAAATCHSHAIESEFLCASSEGIGCDRNDVSNNYGELGDWMALWDTFYKRTYFYNIKTHTSTWDTPLGMEHLVIAGCTESDDSETLKAAEECGTQNNTKPPEETLIEENLEGKQHEEYLSEIGVAVGNLVSDVTTHGEDQSLDHSNECLERSSCNDGVSCCSVSNTQDNIISSNESCIQAAPEVNHTPLENMEIDTSELDTKSDPFESTKSKKVKRRQRQRKLYNEAEDMHFQEVPEVYSATIGKYWCQRYTLFSRYDDGVKMDEEGWFSVTPEAIAQYQAIRCATGVIIDGFTGVGGNAIQFAQKCRHVIGIDIDPLKIEYARHNAGIYEVDDQIDFIVGDFFLLAPKLKADTVFLSPPWGGPDYTKATIYDMKTMLRPHDGYTLFKVAKEIASRIVMFLPKNINFNQLAELSLLSCPPWSLEVEKVYLNGKLKAITAYFSDTAVVGC 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00166 714 PANTHER S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED 279 709 - -
Cca05g00166 714 SUPERFAMILY WW domain 303 333 IPR036020 GO:0005515
Cca05g00166 714 CDD AdoMet_MTases 554 625 - -
Cca05g00166 714 ProSiteProfiles WW/rsp5/WWP domain profile. 305 333 IPR001202 GO:0005515
Cca05g00166 714 CDD WW 303 331 IPR001202 GO:0005515
Cca05g00166 714 Gene3D Vaccinia Virus protein VP39 503 712 IPR029063 -
Cca05g00166 714 ProSitePatterns WW/rsp5/WWP domain signature. 305 331 IPR001202 GO:0005515
Cca05g00166 714 Gene3D - 303 346 - -
Cca05g00166 714 MobiDBLite consensus disorder prediction 103 127 - -
Cca05g00166 714 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 508 667 IPR029063 -
Cca05g00166 714 MobiDBLite consensus disorder prediction 87 129 - -
Cca05g00166 714 MobiDBLite consensus disorder prediction 87 102 - -
Cca05g00166 714 Pfam RNA cap guanine-N2 methyltransferase 553 707 IPR019012 GO:0001510|GO:0008168|GO:0009452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00166 05 3811191 3823288 Cca05g00166 05 3811191 3823288 ECH