LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca05g00165	ATGAGAATGCGAGAGCTAGGGTTTCAGGAACGAAGGCCGTGGAGGCGCGCAGGGTCGCGGCGCGGCGGCGACACCAGCCCTGACTCCGTCATCTTCACTCTCGAGTCCAACTTGAGCCTCTTCTcctccgcctccgccagcgtcgaccgctgctccttcgcctccgACGCGCACGACCACGACTCTCTAGCCTCCGAAATCTCGCTGCATTTGGCGTCGCAGGAGCACGACGCGGATTTCGCTCATTGCGGAAACTGGAGCGGTACAGATCCGGATCCGGATCCGGATCCGCGTAAACGACAACATGCAGATGCAGATGCAGTGCACAGGAAGCAGGAACAAAATCGTTTCCACGGAAAAAGAGAGAAAGCGAAAGCGAAAGTTCAAAAGgaagaagaagaagaagaagaCAGTGACGGTGGTGACACTGAGGACGGAAATCAACTCTCGGAATTTGATTCCGCCAGAAACTCTTTCTCTCTGGCACTCAAAGAATGTCAGGACCGGAGATCAAGATCTGAGGCGTTATTCAAGAAGCACGATCGGAGAAGGCCTGCTTCGTTAGATCTGAACAATGCTATTGGCAATGGCAATGTTTCTTCGCCTCGTTTGGGATTGGGAGCAATGAAGAAGAGCACGCTTTCTTCTCGAAGGTCTGGCTCTGGTAATTTTCCGAGTCCTGGAACGCCTAATTATCTTCAAGCTGGTGTCGCTATGCAAAAGGGTTGGAGTTCGGAGCGAGTTCCCTTGCATTCAAGTGCTGCGCGCAAGCAGGTTGGTGCGGCTCTGTTGCCTTTGAACAACGGCCGGACGTTGCCATCCAAATGGGAGGACGCTGAGAGGTGGATTCTCAGTCCCGTTTCCGGTGACGGCACCGGCAGGGCCTCGCTTCCGGCGCCACAGAGGAGGCCCAAGTCAAAGAGTGGGCCGCTTGGCCCCCctggtgctgctgctgctgctgGGTATTATTCCTTTTATTCCCCTGCGGTGCCTTTGTTTGAAGGTGGGAATTCAGGGAGCTTTATGGTGGCTTCTCCATTTTctgctgctgttggtgtctcagctgctgctgatgGGGTAACGGCCAGCACCGGTGGCAGTTGTGGGGTGCCCCCCACCAAAACTGATCCTTGTATGGCTCGCTCGGTTAGCGTCCACGGATGCTCTCAGATGCAGAGCCAGTCATCATTGCCTGCCCAAGGGGAAAAGTTTGATGGTCTCAAAGATGCTGGCACCAATGTATCTCCTGCCGTTTCAAGGAGGGACATGGCAACCCAGATGAGCCCAGAGGGTAGCTCATGTTCCTCTCCCAATTTGAGGCCTTCTTTCTCTGCCTCCACTCCACCTGCCCTTTCGATTACAGAGTTCAAGAGTTTGCCTTTCTCTAAAATGGATATCAGGGATGTGCCGGTAGATGAACGTGTAACCATGACAAGGTGGTCTAAGAAACATAGGGCCCTATTCTCTGGCAGAGCCTCAGAAAATGTTAACAGCTGGAAAATTAAAGAAACAAGCAGTCGATCTTCATCTTGGGACATTTCTGAAAGGTCAAAGACTGTATCAGAGGCTAAAAGGGAGGAAGCCAAAATTACTGCATGGGAGAACTTGCAAAAGGCAAAGGCTGAGGCAGCAATACGGAAACTAGAGATGAAGTTGGAAAAGAAACGAGCATCATCTATGGATAAGATTATGAACAAGCTGAGATTGGCTCAGAAAAAAGCTCAAGAAATGAGAAGTTCAGTTGTAGCAAACCAACCTCATCAAGTTGCCGGAACTCCTCACAAGGCTATATTATTTCGTCGAGCCAGTCAGATGGGTTCTTTAAGTGGTTGTTTCACTTGTCACGCCTTTTAG	1854	0.4784	MRMRELGFQERRPWRRAGSRRGGDTSPDSVIFTLESNLSLFSSASASVDRCSFASDAHDHDSLASEISLHLASQEHDADFAHCGNWSGTDPDPDPDPRKRQHADADAVHRKQEQNRFHGKREKAKAKVQKEEEEEEDSDGGDTEDGNQLSEFDSARNSFSLALKECQDRRSRSEALFKKHDRRRPASLDLNNAIGNGNVSSPRLGLGAMKKSTLSSRRSGSGNFPSPGTPNYLQAGVAMQKGWSSERVPLHSSAARKQVGAALLPLNNGRTLPSKWEDAERWILSPVSGDGTGRASLPAPQRRPKSKSGPLGPPGAAAAAGYYSFYSPAVPLFEGGNSGSFMVASPFSAAVGVSAAADGVTASTGGSCGVPPTKTDPCMARSVSVHGCSQMQSQSSLPAQGEKFDGLKDAGTNVSPAVSRRDMATQMSPEGSSCSSPNLRPSFSASTPPALSITEFKSLPFSKMDIRDVPVDERVTMTRWSKKHRALFSGRASENVNSWKIKETSSRSSSWDISERSKTVSEAKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRASSMDKIMNKLRLAQKKAQEMRSSVVANQPHQVAGTPHKAILFRRASQMGSLSGCFTCHAF	617

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca05g00165	617	Coils	Coil	560	580	-	-
	Cca05g00165	617	MobiDBLite	consensus disorder prediction	285	313	-	-
	Cca05g00165	617	MobiDBLite	consensus disorder prediction	81	154	-	-
	Cca05g00165	617	Pfam	Remorin, C-terminal region	503	605	IPR005516	-
	Cca05g00165	617	MobiDBLite	consensus disorder prediction	424	447	-	-
	Cca05g00165	617	PANTHER	OS02G0116800 PROTEIN	104	615	-	-
	Cca05g00165	617	MobiDBLite	consensus disorder prediction	187	228	-	-
	Cca05g00165	617	Coils	Coil	538	558	-	-
	Cca05g00165	617	PANTHER	REMORIN FAMILY PROTEIN	104	615	-	-
	Cca05g00165	617	MobiDBLite	consensus disorder prediction	212	228	-	-
	Cca05g00165	617	MobiDBLite	consensus disorder prediction	1	22	-	-
	Cca05g00165	617	MobiDBLite	consensus disorder prediction	92	132	-	-
	Cca05g00165	617	MobiDBLite	consensus disorder prediction	1	29	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca05g00165	Cca-Chr5	3797546	3802722	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca05g00165	05	3797546	3802722	Cca05g00165	05	3797546	3802722	ECH