Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00164 ATGGGTTCCGAGAAACTATTCGGTTGCAATTACCTTTTGCTGAAGCCAGAAAATGCGAGTGTTGTGGATCTTGGGAGTCTCTTGGTGTCTTCTAAGTTAAAGAATAGAGGATTCATCGAATGCCCAGAAGAGGTTGAGGCAAGGGAATTTCGTCAAAGATGGCTCCTCTTCACATCTGTTGTGGCTCAGAAGATCCTCGTTGCCTTAAGAAACACCATGAAAAATGTTGGGGACACCTTGGAGTTGTGGCTTAATCGATTATCAACTAATGGAGGCTTCATATGGCTCTTTCTCAACATTCTAAGAGGAAAGATGATAACACCGGAAAAATCATCGGCGGCATTCTTATCCGTGGTGGGGCACCTTGACACACGAATTGGTTTAGATAAGAGCATAAAGGAGAATGATGCAAAATACAAAGGTTTAATCTCAATGATGGCTTCAAAATTATCATATGAGAATGAACAATTCGTTAGTGACGCAGTCCGAAATCATTGGGATATGGAGTTCTTGGGGCAACACAGCTTCTGGAACGATTACCAAGAGCTCTGGTCCACACGAGCAATCATAGTGCAAGATACCAAGTCAGAACCCAACTTGATCGTGGTTGCATTCAGGGGCACAGAGCCATTCGATGCAGATCAATGGAGAACAGATGTGGATATCTCATGGTACGAGTTGCCCAATGTGGGTAGAATACATGGTGGTTTCATGAAAGCATTAGGTCTACAGAAAAACAGTGGATGGCCCAAAGAGATAGATCAAAGCAGTTCCCAGCATCGTTATGCCTACTATTCAATAAGAGAGAAGCTTAGAGCCATGTTGGAGGCAAAAGAGGATGCAAAATTTATATTGGCAGGGCACAGCTTAGGAGGAGCATTGGCCATTTTGTTTGCTGCAGTGCTCACACTGCATGAGGAGGAATGGTTGTTGGACAAGTTGGAAGGGGTTTACACATTTGGACAGCCACGTGTTGGGGACAATCAGTTTGGGGAGTTCATGAAGGATAAGCTTAGAAAGTATGATGTGAGGTATATGAGGTATGTTTATTGCAACGACGTGGTGCCTAGGGTTCCTTATGATGACAAAACCCTCTTCTTTAAGCACTTTGGCCCTTGCCTCTACTTCAACAGCTTCTACCATGGCCAGGTTCTAGAGGAGGAGCCCAACAAGAATTATTTCTCTTTGTTTTGGGTCATACCCAAGATCCTAAACGCAGTTTGGGAGGTTATTAGAGGATTTCTTATCCCATTTGTAGAAGGTAAAGAGTATATACAAAATTGGTTAATGACGATTTTCAGGCTCTTTGGAATGATAATTCCAGGACTACCGGCTCATTTTCCAACGGATTATATCAATGTTACCAGATTGGGATCCTTACATGGATTTATGGAGCATCAAAATTCACAAGATTCCAAGGCTGACTAA 1428 0.4286 MGSEKLFGCNYLLLKPENASVVDLGSLLVSSKLKNRGFIECPEEVEAREFRQRWLLFTSVVAQKILVALRNTMKNVGDTLELWLNRLSTNGGFIWLFLNILRGKMITPEKSSAAFLSVVGHLDTRIGLDKSIKENDAKYKGLISMMASKLSYENEQFVSDAVRNHWDMEFLGQHSFWNDYQELWSTRAIIVQDTKSEPNLIVVAFRGTEPFDADQWRTDVDISWYELPNVGRIHGGFMKALGLQKNSGWPKEIDQSSSQHRYAYYSIREKLRAMLEAKEDAKFILAGHSLGGALAILFAAVLTLHEEEWLLDKLEGVYTFGQPRVGDNQFGEFMKDKLRKYDVRYMRYVYCNDVVPRVPYDDKTLFFKHFGPCLYFNSFYHGQVLEEEPNKNYFSLFWVIPKILNAVWEVIRGFLIPFVEGKEYIQNWLMTIFRLFGMIIPGLPAHFPTDYINVTRLGSLHGFMEHQNSQDSKAD 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00164 475 Pfam Lipase (class 3) 202 362 IPR002921 GO:0006629
Cca05g00164 475 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 7 467 - -
Cca05g00164 475 SUPERFAMILY alpha/beta-Hydrolases 146 394 IPR029058 -
Cca05g00164 475 CDD Lipase_3 145 377 - -
Cca05g00164 475 Gene3D alpha/beta hydrolase 131 400 IPR029058 -
Cca05g00164 475 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 7 467 IPR044819 GO:0004806|GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00164 Cca-Chr5 3765072 3772517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00164 10 460 Acyl Lipid Metabolism Gene Families AT1G56630 55.769 0.0 538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00164 05 3765072 3772517 Cca05g00164 05 3765072 3772517 ECH