Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00151 ATGGCGAGACTCGCTTGCCCTCTCAGTCGCAGCATCTTCAAGCAATCCCAGCACTGGCGGCCACTCCGGTGTTGCCACGCCCTTACCTTGGCCACGTTGGGTGGCGACGAAGCAAGAAGCACCACCATCAAGCTCTGGAGCAAAGCCAAAAGAAAAGCCTTCTTCGACTCTCCCGAAGGAGTCCTGCTGCGCAACCTCAACGACTGCTCCAAGGACGGCGACGTCGTGCAAGCGCTTCGCCACTACGACCACGCTCGCCAATCGGGGACTCTCCTCACCCTCGACCACTACAACAAGCTTCTCTACCTATGCTCCCTCCAAAACGGCGACGTTCCCCATTTGGGCCTCAAGCGAGGCTTTGAGATTTTCCAGCAGATGCTAAACGACCGCGTTCAGCCCAACGAGGCCACCTTCACCATCGCCGCCAGGGTTGCCGCTGCCAAGGAGGATCCCGACATGGCTTTCGAGTTGCTCAAGCAGATGAAGAATGTCGCTGTTGCTCCCAAGCTCAGATCTTACGAGCCTGCTTTGTTTGGGTTCTGCAAGAGGGGTGATGCTGAGAAGGCTTACTTGGTCGATGCTCACATGGTGGAGTCTGGCATTGTGGCTGAGGAGCCTGAGCTTTCTGCTCTCTTGGAAGTCAGCGTTGCTGCCAAGAAGGAGGACAAGGTGTATGAGATTTTGCACCGGTTGCGCGCCACCGTGAGGCAGGTTTCGGAACCCACTTCGCGGTTGCTTGAGGAGTGGTTTGATTCGGAGTATGCTGGGAAAATTgggagggaggagtgggatgtgaggaaggtgagggaagggattgtgaggggaggtggaggCTGGCATGGACAAGGGTGGCTCGGGAGCGGCCGCTGGACGGTGGCCAAGACTCCGGTCAGCGAGGATGGCGTGTGTTCGTCGTGCGGGGAGAAGCTTGTCAGCATTGATATTGATCCCAAAGAGACTGAAAATTTTTCTGCCTCCTTGTGTAAATTAGCTTGCCAGAAAGAAGCCAAATCAAACTTTGTTCATTTTCAGAAGTGGCTTCAGCGGCATGGCCCGTTTGATGCTGTTGTGGATGGTGCCAATGTAGGCCTTGCCAACGGGCATAAGTTCAGCTTTTCGCAGCTTAATACTGTTGTTGAACAATTACGTCAAATGAGCCCTTCGAAGAGATTGCCACTTGTAATTTTGCATATAAGTCGGGTAAATGGTGGTCCTGCTCAGAATCCAAAAAACAGGAGATTTATAGAAAATTGGAAAAAAAATGGTGCTCTTTATGTCACTCCTCAAGGTTCAAATGATGACTGGTAA 1308 0.5023 MARLACPLSRSIFKQSQHWRPLRCCHALTLATLGGDEARSTTIKLWSKAKRKAFFDSPEGVLLRNLNDCSKDGDVVQALRHYDHARQSGTLLTLDHYNKLLYLCSLQNGDVPHLGLKRGFEIFQQMLNDRVQPNEATFTIAARVAAAKEDPDMAFELLKQMKNVAVAPKLRSYEPALFGFCKRGDAEKAYLVDAHMVESGIVAEEPELSALLEVSVAAKKEDKVYEILHRLRATVRQVSEPTSRLLEEWFDSEYAGKIGREEWDVRKVREGIVRGGGGWHGQGWLGSGRWTVAKTPVSEDGVCSSCGEKLVSIDIDPKETENFSASLCKLACQKEAKSNFVHFQKWLQRHGPFDAVVDGANVGLANGHKFSFSQLNTVVEQLRQMSPSKRLPLVILHISRVNGGPAQNPKNRRFIENWKKNGALYVTPQGSNDDW 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00151 435 Gene3D Tetratricopeptide repeat domain 58 314 IPR011990 GO:0005515
Cca05g00151 435 Pfam Protein-only RNase P 297 435 IPR031595 -
Cca05g00151 435 PANTHER UNCHARACTERIZED 48 435 - -
Cca05g00151 435 Pfam Pentacotripeptide-repeat region of PRORP 50 255 IPR033443 -
Cca05g00151 435 Gene3D - 315 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00151 Cca-Chr5 3419850 3424418 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00151 66 227 Miscellaneous Gene Families AT4G11690 22.840 1.43e-08 55.1