Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00150 ATGAGGTATGGCATTGGTGAGCATGGACTAAGACTAGTTCAATCAAAGCATGCAACAAGAGTGCCACCCCTCCCTCTCTGGGAACCGGCGCAGCGGCGTCTCAGGGGCTGGGCGGCGGCGTTACAGTGGGGTGCGGTGCTGCATGGAGATCGACATGGTGAAGAACCAGCAGGGCACATACGCGGCGAAGAAGGAGAAGGTGGTGGTGCTGTGGGACCTGGACAACAAGCCCCCGCGTGGGCCCCCCTACGACGCCGCCGTTTCGCTCAAGAGCCTGGCCGTAGGGTTCGGGGAGCTGGTGGAGTTCTCGGCCTACGCCAACCGCCACGCCTTCGTGCACCTGCCGCAGTGGGTGGTGGAGCAGCGGCGGGAGCGGAAAAGCCTGGACATCCTGGAGCGGAAGGGAGCGGAGAGGGCGTCGGAGGCGTACACGTGCGGCGTGTGCGGGCGGAAGTGCGGGACCCACGTGGAGCTGAAGAGGCACTTCCGGCAGCTGCACGagcgggagcggcagaagaagctgaaccggctgaggtcgctgaaggggaagaggaagcgggagcggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGGGGTACGGGCTGGCGGCGGAGCTGCGGCGGGCGGGGGTGTTTGTGAAGACGGTGAGGGACAAGCCGCAGGCGGCGGACTGGGCTCTCAAGAGGCAGATGGCGCATTCCATGAGTCGGGGGATTGACTGGCTGTTTTTGGTTTCGGATGATTCGGATTTTTCGGAGATGTTGAGGAGGGCCAGGGAGGTTGATTTGGGGACGGTTGTGGTCGGCGATTGGGATAGGGCTTTGGGGAGGCATGCTGATTTGTGGCTGCCTTGGACTGCGGTTGAGAATGGGGAGGTGGACGTGGATGTGCTTCCCAAGAGAAGGAAACATGTTTTCCAAGACCATCACTTGAATGGGGAGGAATTTCTGGTTTTGTATAGtgaggatgaggatgaggatgaggatgaggatgaggatgTGGAGGACTATTATGAAGAACAAGAGGAGGAGGAGGAAGATGGGTTTTCTATTTTTTGA 1134 0.4947 MRYGIGEHGLRLVQSKHATRVPPLPLWEPAQRRLRGWAAALQWGAVLHGDRHGEEPAGHIRGEEGEGGGAVGPGQQAPAWAPLRRRRFAQEPGRRVRGAGGVLGLRQPPRLRAPAAVGGGAAAGAEKPGHPGAEGSGEGVGGVHVRRVRAEVRDPRGAEEALPAAARAGAAEEAEPAEVAEGEEEAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGYGLAAELRRAGVFVKTVRDKPQAADWALKRQMAHSMSRGIDWLFLVSDDSDFSEMLRRAREVDLGTVVVGDWDRALGRHADLWLPWTAVENGEVDVDVLPKRRKHVFQDHHLNGEEFLVLYSEDEDEDEDEDEDVEDYYEEQEEEEEDGFSIF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00150 377 PANTHER OS06G0166200 PROTEIN 222 365 - -
Cca05g00150 377 MobiDBLite consensus disorder prediction 144 160 - -
Cca05g00150 377 MobiDBLite consensus disorder prediction 98 188 - -
Cca05g00150 377 PANTHER - 222 365 - -
Cca05g00150 377 MobiDBLite consensus disorder prediction 50 77 - -
Cca05g00150 377 MobiDBLite consensus disorder prediction 346 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00150 Cca-Chr5 3414096 3416826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00150 223 349 C2H2 Transcription Factor Family AT5G52010 65.909 2.85e-50 171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00150 05 3414096 3416826 Cca05g00150 05 3414096 3416826 ECH