Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00148 ATGGACACTGTGATGGCCTCAGCCGTCATGAATTTCATGAACGCGACGTTGGATTGCGTCAAGTTTGCGTTGGACGCTCCTTCTGCGCGAGCTGTGGTTTTTGGAGTCCATATCGGGGGACATTTGTTCATCGAGGTTTTTCTGCTGGTGGTCATACTTTTCTTGCTTTCACAGAAAAGTTACAAGCCTCCTAAAAGGCCATTAACAAACAAGGAAATTGATGAGTTATGTGAGGAATGGGTTCCAGGACCCCTTATTCCTTCTCTTGATAAAGAGTTGCAGTATGAACCGCCAGTGCTGGAGAGTGCTGCTGGGCCACATACCATAGTTAATGGAAAAGAAGTTGTTAATTTTGCTTCAGCAAACTATCTTGGTTTTATTGGTCATCCAAAGCTACTTGACTCATGTTCTTCTGCTTTAGCGAAATATGGTGTTGGTTCTTGTGGTCCCCGTGGGTTTTATGGGACAATTGATGTCCACCTTGACTGTGAAACAAGGATAGCAAAGTTTTTAGGAACCCCTGATTCAATTCTGTACTCTTATGGACTTTCCACCATGTTCAGTGCAATTCCTGCTTTCTCTAAGAAAGGAGATATAATTGTAGCGGATGAAGGAGTCCACTGGGGAATACAGAATGGCCTTTATCTTTCTAGAAGCACAGTGGTGTATTTTAAGCACAATGACATGGACTCTTTAAGAGAAACTCTAGAGAAAATTACTACCAAATACAAGCGGACCAAGAATTTGAGGCGTTATATTGTTATTGAAGCTGTCTACCAGAATTCTGGCCAAATAGCACCCTTGGATGAGATCATTAAATTGAAGGAAAAACATCGTTTTCGTGTTTTGCTGGATGAGAGCAACTCATTGGGTGTGCTTGGAAGTTCTGGAAGAGGTCTCACTGAATACTATGGAGTTCCGGCTGAGAAGATAGACATTATAACTGCCTCAATGGGACATGCATTGGCTACAGAAGGAGGATTCTGCACCGGAAATGCAAGAGTTATAGATCACCAGCGATTGAGTAGCTCTGGTTACGTATTTTCTGCTTCTTTACCCCCTTATCTTGCAAGCGCTGCAATTACTGCTATTGATGTCCTGGAGGAAAATCCCAATCTAATAACAAAGCTGAAGAGCAATATTACGTTGTTAAGGAAAGGATTGTCAAAAATACCAGGCATCACAATTGCAAGTAACCCAGAGTCGCCCATTGTTTATTTAAGATTAGAGAAATCAACTGGTTCCATGAAAGATGACCTAAATCTGCTTGAAAATATAGCCGAACGGGTTTTGAAAGAAGAATCTGTATTTGTGGTGACTTCCAAAAGATCAACATTGGACAAATGCCGTTTGCCTGTAGGAATTAGATTGTTTGTTTCTGCAGGGCATTCAGAGTCTGATCTGCTCAAGGCATCTGAATCATTGAAAAAGGTTGCAGCATCAGTCCTGGGTGGTCATAATTGA 1464 0.418 MDTVMASAVMNFMNATLDCVKFALDAPSARAVVFGVHIGGHLFIEVFLLVVILFLLSQKSYKPPKRPLTNKEIDELCEEWVPGPLIPSLDKELQYEPPVLESAAGPHTIVNGKEVVNFASANYLGFIGHPKLLDSCSSALAKYGVGSCGPRGFYGTIDVHLDCETRIAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRETLEKITTKYKRTKNLRRYIVIEAVYQNSGQIAPLDEIIKLKEKHRFRVLLDESNSLGVLGSSGRGLTEYYGVPAEKIDIITASMGHALATEGGFCTGNARVIDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPNLITKLKSNITLLRKGLSKIPGITIASNPESPIVYLRLEKSTGSMKDDLNLLENIAERVLKEESVFVVTSKRSTLDKCRLPVGIRLFVSAGHSESDLLKASESLKKVAASVLGGHN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00148 487 Pfam Aminotransferase class I and II 114 475 IPR004839 GO:0009058|GO:0030170
Cca05g00148 487 Gene3D Aspartate Aminotransferase, domain 1 108 472 IPR015422 GO:0003824
Cca05g00148 487 SUPERFAMILY PLP-dependent transferases 89 479 IPR015424 -
Cca05g00148 487 PANTHER LONG CHAIN BASE BIOSYNTHESIS PROTEIN 1-LIKE 7 484 - -
Cca05g00148 487 Coils Coil 229 249 - -
Cca05g00148 487 Gene3D - 129 370 IPR015421 GO:0003824
Cca05g00148 487 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 7 484 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00148 5 339 Acyl Lipid Metabolism Gene Families AT4G36480 78.209 0.0 561